Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1193g00007 ATGGCAACAGTTTCTTGCAGGTTGTTTTCCTTTCTTTGTTGTCTCCTTTTCATGATCATATCTCAAACCAGCGCCCAGTCAAGTCCTCTATCTCGCATCTGCGTCAATGAGAAAGGCAACTACACAGCCAATAGCACATATCAGACCAACCTCAACACCCTTTTACCCAATCTCACTTCCAACACAGAAATCGACTATGGTTTCTACAATTTCTCATATGGCCAAAACATTGACAAAGTAAACGCCATTGGACTGTGCAGAGGAGATGTTAAACCAGATGCATGCCGCAGTTGCCTCAACGATTCCAGAGTCAGTCTCACACAGCTTTGTCCGAACCAGAAAGAGGCATATGTGTGGTTTGACAAGTGCATGTTGCGCTACTCGAACCGCTCAATATTTGGCGTCGTGGAAACTTTACTTCCTTTAGATTATATGTGGGACTTAAACAATGCAACGGATGTGGATCAGTTCAATCAAGTGCTGTTTAACTTGATGAGGAATCTAAAAGGCGCAGCTGCATCAGGTGACTCTCGTCGTAAGTATGCTGCGGATAATGCAACTGTTTCAACTTTTCAAACCATATATGGTCTTGTGCAGTGCACGCCTGATTTGTCATGGGAAGCCTGCAATGGCTGCTTGGATGGGGCTATCTCGGAAATCCCAAAGTGTTGCAATGCTAGAAGTGGTGTTAGAGTTATTGCACCCAGTTGTAATATTAGATACGAAACCTATGGCTTTTACGATCCCACACCTTCACCGTCCTCACAAGGAAAGAGCAACACATCACGAACTGCCATCGTCATAGCTGTGCCGGTTGTTGGTGTTGTTGTTTTGGTCCTAAGTTTTATCTGCATCTATTTAAGAATGAGGAAGCCAAGGAAATATTTTGAAACTGAAGTTAATGATGATGAAATTATAACCAATGAGTCATTGCAATTCAACTTTGATACCATACGAGTTGCTACAAACGACTTCTCAGATTCTAACAAACTTGGACAAGGTGGATTTGGAGCTGTTTACAGGGGTAGGTTCTCTAATGGACAAGTGATTGCTGTCAAAAGGTTGTCAAGAGATTCCGGCCAAGGAGATACGGAATTTAAGAATGAAGTGCTTTTATTGGCAAAGCTTCAGCACCGAAATTTAGTTAGACTACTTGGTTACTGTCTGGAAGGAAGAGAAAGGCTACTTACCTATGAATTTGTTCCAAATAAAAGCCTTGATTACTTCATATTTGATCCAACCAAGAAAGCACAATTGAATTGGGAAAGGCGCTACAAAATCATTGTAGGCATTGCTCGAGGTCTTCTTTACCTTCATCAAGATTCACAACTACGCATTATACATCGAGATCTCAAAGCTAGCAACATTCTCTTAGATGAAGAGATGAATCCTAAGATATCAGATTTTGGCTTGGCAAGACTGTTTGTTGTGGATCAAACAGGAGGAAGTACAAGTAGAATCGTTGGAACTTATGGATATATGGCACCAGAGTATGCAATGCATGGACAATTTTCAGTGAAATCAGATGTTTTTAGTTTTGGTGTACTGACTCTTGAGATTGTTAGTGGCCAGAAAAATAGCAGCCTTCACAACGGGGAGAGGGTAGAGGATCTACTGAGCTTTGCATGGAGAAACTGGAGGGAGGGGACCGCTACAAATATTGTAGATCCATCATTAAACAACAGTTCGGAAAATGAGATGATGAGATGCATCCACATTGGTTTACTCTGTGTTCAAGAAAATTTAGCTAACAGACCAACCATGGCTGCTGTTACACTCATACTTAATAGCTATTATCAGACTCTCCCGGTACCTTCCGAACCTGCATTTTATATGGACAGTAGAACTGGAAGCCTTCCACACGTGCAATCTTGGGAGTATAATTCAAGGGCAACAATATCAACTGAATCTGCAAATGAATCAGCTCAAGAATTGGTTAATGAGGCTTCAATTACTGAGCTAGACCCTCGATAG 1974 0.4159 MATVSCRLFSFLCCLLFMIISQTSAQSSPLSRICVNEKGNYTANSTYQTNLNTLLPNLTSNTEIDYGFYNFSYGQNIDKVNAIGLCRGDVKPDACRSCLNDSRVSLTQLCPNQKEAYVWFDKCMLRYSNRSIFGVVETLLPLDYMWDLNNATDVDQFNQVLFNLMRNLKGAAASGDSRRKYAADNATVSTFQTIYGLVQCTPDLSWEACNGCLDGAISEIPKCCNARSGVRVIAPSCNIRYETYGFYDPTPSPSSQGKSNTSRTAIVIAVPVVGVVVLVLSFICIYLRMRKPRKYFETEVNDDEIITNESLQFNFDTIRVATNDFSDSNKLGQGGFGAVYRGRFSNGQVIAVKRLSRDSGQGDTEFKNEVLLLAKLQHRNLVRLLGYCLEGRERLLTYEFVPNKSLDYFIFDPTKKAQLNWERRYKIIVGIARGLLYLHQDSQLRIIHRDLKASNILLDEEMNPKISDFGLARLFVVDQTGGSTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLTLEIVSGQKNSSLHNGERVEDLLSFAWRNWREGTATNIVDPSLNNSSENEMMRCIHIGLLCVQENLANRPTMAAVTLILNSYYQTLPVPSEPAFYMDSRTGSLPHVQSWEYNSRATISTESANESAQELVNEASITELDPR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1193g00007 657 MobiDBLite consensus disorder prediction 636 657 - -
Gabi1193g00007 657 Gene3D Phosphorylase Kinase; domain 1 288 400 - -
Gabi1193g00007 657 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 132 - -
Gabi1193g00007 657 Gene3D Transferase(Phosphotransferase) domain 1 401 604 - -
Gabi1193g00007 657 ProSiteProfiles Protein kinase domain profile. 325 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00007 657 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Gabi1193g00007 657 SUPERFAMILY Protein kinase-like (PK-like) 310 629 IPR011009 -
Gabi1193g00007 657 FunFam Cysteine-rich receptor-like protein kinase 10 288 400 - -
Gabi1193g00007 657 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Gabi1193g00007 657 Pfam Protein tyrosine and serine/threonine kinase 328 591 IPR001245 GO:0004672|GO:0006468
Gabi1193g00007 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Gabi1193g00007 657 FunFam cysteine-rich receptor-like protein kinase 10 401 602 - -
Gabi1193g00007 657 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 657 - -
Gabi1193g00007 657 CDD STKc_IRAK 331 591 - -
Gabi1193g00007 657 SMART serkin_6 325 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00007 657 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Gabi1193g00007 657 Pfam Salt stress response/antifungal 150 244 IPR002902 -
Gabi1193g00007 657 Gene3D - 141 246 IPR038408 -
Gabi1193g00007 657 Gene3D - 28 131 IPR038408 -
Gabi1193g00007 657 FunFam Cysteine-rich receptor-like protein kinase 10 142 246 - -
Gabi1193g00007 657 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1193g00007 Gabi-Chr1193 81858 85895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1193g00007 7 657 Receptor kinase-like Gene Family AT4G21410 49.204 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1193g00007 PK_Tyr_Ser-Thr 9.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1193g00007 - - gmx:100791056 930.628