Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1190g00011 ATGGCTTCCGAGGTGGTGAATCTGAATGTGAGAATCACTGGCAAGAGTCATGTGAAACCCCAAGAGGAAATTGGGAGGAAAGAGTGTCAATTGGTCACTTTTGATCTTCCCTATCTAGCTTTCTACTATAACCAGAAGCTACTTTTTTACAAAGGGGATGGTGATTTTGAGGGTATGGTTAAGAAACTGAAAGATGGGCTTTGTGTAGTTCTGAAGGAGTTCCATCAACTAGCTGGTAAGTTAGGGAAAGATGAAGAGGGTGTGTTTAGAGTGGAATATGATGATGACATGCTTGGTGTTGAGGTCACTGAAGCAGTTGCTGATGAGATTGGTGTAGCAGATCTAACTGTGGCTGAAAGTACCAGCATTTTGAAGGAGCTTATACCTTACAATGATATCTTGAATTTGGAAGGCATGCACAGACCCTTGCTGGCAATTCAGTTAACTAAGCTCAAAGACGGGCTTGCAATGGGCCTTGCGTTCAACCATGCTGTGCTTGATGGTACTTCCACGTGGCATTTCATGAGCTCATGGGCTGAGATCTGTAGCGGTTCACCAACTACGTCAGCCATACCCTTCCTTGACCGCACCAAGGCCCGGAATACACGAGTTAAGCTTGATCTGTCTCCACCCGAGCCCAAAGGCCAACCTGCTACCTCCAACGGTGAGGTAAAGCCGGAGTCTGGGCCCAAGCCCGTACTCAGGGAAAAGATCTTCAAGTTCTCTGAGTCAGCCATCGACAAGATCAAGTCAACGGTCAACGAAAACCCTTCATCTGACGGTTCAAAACCATTCTCAACATTTCAAGCTCTTTCCACTCATGTTTGGCGCCATGTAACCCATGCACGTGAACTAAAACCTGAGGACTACACTGTGTTCACCGTTTTTGCTGATTGTCGGAAAAGGGTCGATCCGCCGATGCCGGAGACTTACTTCGGAAACCTAATCCAGGCTGTGTTCACCGTTACAGCAGCCGGGCTTTTGTCGGCCCATCCGCCGCAATTCGGGGCTTCCTTGATCCAGAAGGCCATTGAAGCCCACAATGCTAAAGCCATTGATGAACGTAACAAAGAGTGGGAGAGTGCACCTAAGATTTTCCAATTCAAAGATGCAGGGGTGAATTGTGTGGCAGTGGGAAGTTCACCAAGGTTTAAGGTTTATGACATTGATTTTGGATGGGGGAAGCCAGAGATAGTGAGGAGTGGAACTAATAACAAGTTTGATGGTATGATTTATTTGTATCCAGGGACGAGTGGAGGAAGGAGCATTGATGTGGAGTTAACCTTGGAGCCTGAAGCTATGGGGAGGTTGGAACAAGATAAGGAGTTTCTTATGGAGGTATGA 1344 0.4688 MASEVVNLNVRITGKSHVKPQEEIGRKECQLVTFDLPYLAFYYNQKLLFYKGDGDFEGMVKKLKDGLCVVLKEFHQLAGKLGKDEEGVFRVEYDDDMLGVEVTEAVADEIGVADLTVAESTSILKELIPYNDILNLEGMHRPLLAIQLTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEICSGSPTTSAIPFLDRTKARNTRVKLDLSPPEPKGQPATSNGEVKPESGPKPVLREKIFKFSESAIDKIKSTVNENPSSDGSKPFSTFQALSTHVWRHVTHARELKPEDYTVFTVFADCRKRVDPPMPETYFGNLIQAVFTVTAAGLLSAHPPQFGASLIQKAIEAHNAKAIDERNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPEIVRSGTNNKFDGMIYLYPGTSGGRSIDVELTLEPEAMGRLEQDKEFLMEV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1190g00011 447 Gene3D - 6 210 IPR023213 -
Gabi1190g00011 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 12 444 - -
Gabi1190g00011 447 Gene3D - 215 440 IPR023213 -
Gabi1190g00011 447 Pfam Transferase family 9 443 - -
Gabi1190g00011 447 FunFam Tryptamine hydroxycinnamoyl transferase 219 441 - -
Gabi1190g00011 447 MobiDBLite consensus disorder prediction 203 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1190g00011 Gabi-Chr1190 179736 182698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1190g00011 8 447 Monolignol Biosynthesis Gene Families AT5G48930 28.446 3.77e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1190g00011 K19747 - gmx:100790669 765.377