Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1188g00002 ATGCCTATCATGGCTTCCTCTCCCTTCTCTCTGCTTCTTCCACTTGGTTCTACTTGTGGTAAAAGTCTGTGTTTTACTCCTCCTCAAGGCATTTCGGTTGAGAAACTTGGAAGATTAGTTGTTAAAGTGAAGTCCTCAGAGACAAAGGAATGCAGTGCTATGTTTAACAGTAATTCACGTAGAGAGTTTCTTTGGTTAGCTTTAGGAGTATCTGGCCTCTTCAACCATTCATTGGATGCCAAAGGAGCGGGTTTGCCCCCTGAGGAAAAGCCAAAACTATGTGATGACACTTGTGAGAAAGAGCTTGAAAATGTGCCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAGGTTGGGAAAGGCCCTAGTCCACCAGTTGGATTTCAGGTTGCCGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGTCAGCTTTACATTTTTCGCGTTGGTTCTGGTCAGGTAATAAAGGGACTTGATGAAGGTATTCTAAGCATGAAAATAGGAGGGAAGCGTCGACTGTACATACCTGGATCTTTGGCATTCCCAAAAGGCCTTACTTCTGCTCCAGGAAGACCAAGGGTGGCTCCAAGCAGTCCAGTCATATTTGATGTTAGTTTGGAATATATCCCGGGGCTTGAAGTGGATGACGAATAA 690 0.4304 MPIMASSPFSLLLPLGSTCGKSLCFTPPQGISVEKLGRLVVKVKSSETKECSAMFNSNSRREFLWLALGVSGLFNHSLDAKGAGLPPEEKPKLCDDTCEKELENVPMVTTESGLQYKDIKVGKGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGILSMKIGGKRRLYIPGSLAFPKGLTSAPGRPRVAPSSPVIFDVSLEYIPGLEVDDE 229
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi1188g00002 229 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 130 222 IPR001179 GO:0003755
Gabi1188g00002 229 SUPERFAMILY FKBP-like 95 218 - -
Gabi1188g00002 229 FunFam Peptidylprolyl isomerase 102 220 - -
Gabi1188g00002 229 Gene3D - 89 219 IPR046357 GO:0003755
Gabi1188g00002 229 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 81 222 - -
Gabi1188g00002 229 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 130 218 IPR001179 GO:0003755
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi1188g00002 Gabi-Chr1188 13717 20599 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1188g00002 107 218 Calmodulin-binding Proteins AT5G48570 38.053 2.88e-12 63.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1188g00002 K01802 - gmx:100818743 387.111