Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1184g00001 ATGATTATATTGCTATTGTTGAAGCTCCCTTCTTTTTCTTCTCCTTACTTTCTTCCTTCTTTATTGCTTCGTTTCATATTATTATTATTATTTGTTTCGTGCAAAACAAAGGCTGTGGTGAAATTGCCACCAAATGTTTCAGTCCCAGCAGTGTTAGTGTTTGGAGATTCGATCATGGATACGGGCAACAACAACAACAACTTGCTAACAACTGCTCGGTGCAACTTCCCACCATATGGTCAAGATTTTGAAGGAGGGATCCCAACTGGTCGATTTGGAAACGGAAAGGTTCCATCAGACCTTATAGTTGAAGAATTAGGCATCAAGGAGCTTCTACCAGCATACTTGGATCCAAATCTTAAATCTAGTGATTTGGCCACTGGTGTGTGCTTTGCGTCCGGTGGCGCCGGATACGATCCTTTGACATCACAATTAGCGTCGGCTATACCTTTATCCGGTCAACTAGACCTGTTCAAAGAATACATAGGGAAGTTAAAAGGACTTGTTGGAGAGGACAGAACAAACTTCATCTTAGCCAACAGTCTTTTTTTTTTGGTATTAGGCAGCAACGACATTTCCAACACCTACTTCTTGTCTCGTGTTAGACAACTGCAATATGATGTTCCTTCTTACACTGACCTTATGGTCAGATCAGCTTCTAATTTCTTGAAGGAAATTTATCAATTAGGGGCACGAAGGATTGGAGTGTTCAGTGCTCCACCAATTGGGTGTGTGCCATTTCAGAGAACCGCGGCTGGAGGAATAGAAAGAAAATGCGTAGCACAGTACAACGACGCAATAGAATTATTTAACAGCAAATTGTCAAATGAGCTGGATTCTCTTAACCAAAATTTTCCCAACAGCAGGATTGTTTACATTGATGTTTACAACCCTCTCCTTGATATCATTGTAAACTACCAAAACTATGGCTATAAAGTCGGAAACAGAGGGTGTTGTGGCACGGGCACAGTAGAGGTAGTATTCTTATGCAACCTTTTGGTTCCCCGGTGTCCAAATGTTTTGGAGTATGTGTTTTGGGACAGTTTTCATCCTTCGGAAAGCGTTTACAGAAAGCTCGTAGCTCCTATTCTTCGAAAATATATGTACGATTTCATATGA 1119 0.4093 MIILLLLKLPSFSSPYFLPSLLLRFILLLLFVSCKTKAVVKLPPNVSVPAVLVFGDSIMDTGNNNNNLLTTARCNFPPYGQDFEGGIPTGRFGNGKVPSDLIVEELGIKELLPAYLDPNLKSSDLATGVCFASGGAGYDPLTSQLASAIPLSGQLDLFKEYIGKLKGLVGEDRTNFILANSLFFLVLGSNDISNTYFLSRVRQLQYDVPSYTDLMVRSASNFLKEIYQLGARRIGVFSAPPIGCVPFQRTAAGGIERKCVAQYNDAIELFNSKLSNELDSLNQNFPNSRIVYIDVYNPLLDIIVNYQNYGYKVGNRGCCGTGTVEVVFLCNLLVPRCPNVLEYVFWDSFHPSESVYRKLVAPILRKYMYDFI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1184g00001 372 PANTHER GDSL ESTERASE/LIPASE EXL3 29 360 - -
Gabi1184g00001 372 FunFam GDSL esterase/lipase APG 40 368 - -
Gabi1184g00001 372 Pfam GDSL-like Lipase/Acylhydrolase 51 360 IPR001087 GO:0016788
Gabi1184g00001 372 SUPERFAMILY SGNH hydrolase 180 364 - -
Gabi1184g00001 372 CDD SGNH_plant_lipase_like 49 367 IPR035669 -
Gabi1184g00001 372 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 51 62 IPR008265 GO:0006629|GO:0016298
Gabi1184g00001 372 Gene3D SGNH hydrolase 41 367 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1184g00001 Gabi-Chr1184 137977 150136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1184g00001 45 365 Pollen Coat Proteome AT1G75910 41.667 1.01e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1184g00001 - - gmx:100793604 572.778