Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1175g00003 ATGGATCTTGAGTCTGTGATCCACAAGAACACAATTAAGGAGGAATCATGGAAGACAGTGTTGACTCTGGCTTATCAGAGTTTGGGAGTTGTCTATGGAGACTTGAGCACTTCCCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGATATTCAGCATTCAGAGACCAATGAAGAAATCTATGGGGTCTTATCTTTTGTGTTCTGGACACTTACACTGATTCCTCTTCTCAAGTATGTGTTCATTGTGCTTAGAGCTGATGACAATGGTGAAGGAGGGACTTTTGCTCTCTACTCCTTGCTATGCCGCCATGCCCGTGTTAGCTTGTTGCCTAACACTCAGGTAGCAGATGAGAACTTAACTGAGTACACTATTGATGGAACAACACCTATCAATAAGAAAAATGTTGGGTGGGGCTTTAAATCATTGTTGGAGAAACATAGGGTGCTGCAAAGGGTGTTGCTTGTTCTGGCTTTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTCACACCAGCAATTTCTGTTTTTTCTGCTGTGTCAGGCTTGGAGCTTTCAATGTCTAAAGAGCAGCACCGATATGTTGAGGTTCCAGTTGCTTGTGTAATACTGGTGTTTTTGTTTGCGCTTCAACATTATGGCACCCACCGCGTGGGATGTCTTTTTGCTCCTGTTGTGTTGACCTGGCTACTATGCATCAGTGCTATTGGTGTTTATAATATCTTCCATTGGAATCCACATGTTTATCAAGCTCTCTCCCCATACTACATGTTCAAATTTCTGAAAAAGACCCAAAAGAGAGGGTGGATGTCCTTGGGTGGGATTCTATTGTGTATAACAGGTTCAGAAGCTATGTTTGCTGATTTAGGACACTTTTCACAATTGTCAATTAAGATTGCTTTCACCTTTTTGGTATATCCTTCTTTAATCCTAGCGTATATGGGACAAGCTGCGTATCTTTCCAAGCATCATTCCCTTGAAAGTGACTATCGAATCGGGTTCTATGTATCTGTGCCTGTAAAACTTCGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGCCAAGCTGTTATCACAGGGACTTTCTCAATAATCAAACAATGTTCTGCTTTGGGATGCTTCCCCAAAGTCAAAATCATTCATACATCATCTAAGATACATGGACAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTACTTTGCCTGGCTATTACAGTTGGATTCAGAGATACTAAACGCATGGGAAATGCAGCAGGTTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTAGTTATAGTCTTATGCTGGCACAAAAGCGTCTTGCTAGCTATTTGCTTCATATTGTTCTTTGGCTCCATTGAAGCACTCTACTTCTCTGCATCCCTCATAAAGTTCCTTGAAGGGGCTTGGGTCCCCATTGCCCTATCCCTTATCTTTCTTCTTGTCATGTATGTGTGGCACTATGGAACACTTAAGAAGTATGAGTTTGATGTTGAAAATAAGGTCCCCATCAACTGGCTCCTCAGTTTGGGCCCCACTCTAGGAATTGTCAGGGTTAAGGGAATTGGCCTCATACATACTGAGCTTGTATCTGGGATCCCAGCTATCTTCTCTCACTTTGTTACCAACCTACCAGCTTTCCATCAAGTTGTAATCTTCCTGTGCGTCAAATCTGTCCCAGTGCCACATGTCAGACCTGAAGAAAGGTTCTTAGTTGGTAGAGTTGGTCCGAAGGAATATAGGCTATATAGGTGCATAGCGCGATATGGCTACCGCGATATTCACAAGGATGACATTGAGTTCGAGAAAGATCTTATTTGCAGCGTAGCAGAATTTATCAGGTCAGATACTTCTGAGTATGGCTTAGGATTTGGGAGTTTTGAAGATGATACAAAGATGACAGTTGTTGGGACTTCAGCATCAAACTTAGAGGGTGTGAGGATGTCTGAAGATGATCAAGATAATTCTCAGATGGAAGGCACTTCAGAGTTGATGGAGGTTAAGTCTCCCGAGAGAGTGAAGAAGCGAGTGCGGTTTGTCGTGCCAGACAGTCCACAGATTGATTTGGATGCAAGGGAGGAGTTGCTTGAGCTAATGGAAGCAAAGGAGGCAGGAATGGCATTTATAATGAGTCACTCATATGTGAGAGCAAAAAGAGGATCAAGCTGGATAAAGAAAGTTGTAATCAATTATGGGTATGATTTCTTAAGGAGAAACTCTAGAGGACCAACTTATGCTTTGAGTATACCTCATGTATCTACCTTAGAGGTGGGCATGATCTATCATGTCTGA 2328 0.4253 MDLESVIHKNTIKEESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPNTQVADENLTEYTIDGTTPINKKNVGWGFKSLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACVILVFLFALQHYGTHRVGCLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMFKFLKKTQKRGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKIHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFILFFGSIEALYFSASLIKFLEGAWVPIALSLIFLLVMYVWHYGTLKKYEFDVENKVPINWLLSLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDIEFEKDLICSVAEFIRSDTSEYGLGFGSFEDDTKMTVVGTSASNLEGVRMSEDDQDNSQMEGTSELMEVKSPERVKKRVRFVVPDSPQIDLDAREELLELMEAKEAGMAFIMSHSYVRAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHVSTLEVGMIYHV 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1175g00003 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi1175g00003 775 NCBIfam potassium uptake protein 23 775 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi1175g00003 775 MobiDBLite consensus disorder prediction 660 679 - -
Gabi1175g00003 775 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1175g00003 Gabi-Chr1175 5033 11452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1175g00003 1 773 Inorganic Solute Cotransporters AT5G14880 77.481 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1175g00003 K03549 - gmx:100799414 1438.32