Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1175g00002 ATGGATCTTGAGTCTGTGATCCACAAGAACACAATTAAGGAATCATGGAAGACAGTGTTGACTCTGGCTTATCAGAGTTTGGGAGTTGTCTATGGAGACTTGAGCACTTCCCCACTTTATGTTTACAAAAGCACTTTTGCTGAGGATATTCAGCATTCAGAGACCAATGAAGAAATCTATGGGGTCTTATCTTTTGTGTTCTGGACACTTACACTGATTCCTCTTCTCAAGTATGTGTTCATTGTGCTTAGAGCTGATGACAATGGTGAAGGAGGGACTTTTGCTCTCTACTCCTTGCTATGCCGCCATGCCCGTGTTAGCTTGTTGCCTAACACTCAGGTAGCAGATGAGAACTTAACTGAGTACACTATTGATGGAACAACACCTATCAATAAGAAAAATGTTGGGTGGGGCTTTAAATCATTGTTGGAGAAACATAGGGTGCTGCAAAGGGTGTTGCTTGTTCTGGCTTTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTCACACCAGCAATTTCTGTTTTTTCTGCTGTGTCAGGCTTGGAGCTTTCAATGTCTAAAGAGCAGCACCGATATGTTGAGGTTCCAGTTGCTTGTGTAATACTGGTGTTTTTGTTTGCGCTTCAACATTATGGCACCCACCGCGTGGGATGTCTTTTTGCTCCTGTTGTGTTGACCTGGCTACTATGCATCAGTGCTATTGGTGTTTATAATATCTTCCATTGGAATCCACATGTTTATCAAGCTCTCTCCCCATACTACATGTTCAAATTTCTGAAAAAGACCCAAAAGAGAGGGTGGATGTCCTTGGGTGGGATTCTATTGTGTATAACAGGTTCAGAAGCTATGTTTGCTGATTTAGGACACTTTTCACAATTGTCAATTAAGATTGCTTTCACCTTTTTGGTATATCCTTCTTTAATCCTAGCGTATATGGGACAAGCTGCGTATCTTTCCAAGCATCATTCCCTTGAAAGTGACTATCGAATCGGGTTCTATGTATCTGTGCCTGTAAAACTTCGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGCCAAGCTGTTATCACAGGGACTTTCTCAATAATCAAACAATGTTCTGCTTTGGGATGCTTCCCCAAAGTCAAAATCATTCATACATCATCTAAGATACATGGACAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTACTTTGCCTGGCTATTACAGTTGGATTCAGAGATACTAAACGCATGGGAAATGCAGCAGGTTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTAGTTATAGTCTTATGCTGGCACAAAAGCGTCTTGCTAGCTATTTGCTTCATATTGTTCTTTGGCTCCATTGAAGCACTCTACTTCTCTGCATCCCTCATAAAGTTCCTTGAAGGGGCTTGGGTCCCCATTGCCCTATCCCTTATCTTTCTTCTTGTCATGTATGTGTGGCACTATGGAACACTTAAGAAGTATGAGTTTGATGTTGAAAATAAGGTCCCCATCAACTGGCTCCTCAGTTTGGGCCCCACTCTAGGAATTGTCAGGGTTAAGGGAATTGGCCTCATACATACTGAGCTTGTATCTGGGATCCCAGCTATCTTCTCTCACTTTGTTACCAACCTACCAGCTTTCCATCAAGTTGTAATCTTCCTGTGCGTCAAATCTGTCCCAGTGCCACATGTCAGACCTGAAGAAAGGTTCTTAGTTGGTAGAGTTGGTCCGAAGGAATATAGGCTATATAGGTGCATAGCGCGATATGGCTACCGCGATATTCACAAGGATGACATTGAGTTCGAGAAAGATCTTATTTGCAGCGTAGCAGAATTTATCAGGTCAGATACTTCTGAGTATGGCTTAGGATTTGGGAGTTTTGAAGATGATACAAAGATGACAGTTGTTGGGACTTCAGCATCAAACTTAGAGGGTGTGAGGATGTCTGAAGATGATCAAGATAATTCTCAGATGGAAGGCACTTCAGAGTTGATGGAGGTTAAGTCTCCCGAGAGAGTGAAGAAGCGAGTGCGGTTTGTCGTGCCAGACAGTCCACAGATTGATTTGGATGCAAGGGAGGAGTTGCTTGAGCTAATGGAAGCAAAGGAGGCAGGAATGGCATTTATAATGAGTCACTCATATGTGAGAGCAAAAAGAGGATCAAGCTGGATAAAGAAAGTTGTAATCAATTATGGGTATGATTTCTTAAGGAGAAACTCTAGAGGACCAACTTATGCTTTGAGTATACCTCATGTATCTACCTTAGAGGTGGGCATGATCTATCATGTCTGA 2325 0.4249 MDLESVIHKNTIKESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPNTQVADENLTEYTIDGTTPINKKNVGWGFKSLLEKHRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACVILVFLFALQHYGTHRVGCLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMFKFLKKTQKRGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKIHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFILFFGSIEALYFSASLIKFLEGAWVPIALSLIFLLVMYVWHYGTLKKYEFDVENKVPINWLLSLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDIEFEKDLICSVAEFIRSDTSEYGLGFGSFEDDTKMTVVGTSASNLEGVRMSEDDQDNSQMEGTSELMEVKSPERVKKRVRFVVPDSPQIDLDAREELLELMEAKEAGMAFIMSHSYVRAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHVSTLEVGMIYHV 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1175g00002 774 Pfam K+ potassium transporter 24 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi1175g00002 774 NCBIfam potassium uptake protein 22 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi1175g00002 774 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi1175g00002 774 MobiDBLite consensus disorder prediction 659 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1175g00002 Gabi-Chr1175 5033 11453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1175g00002 1 772 Inorganic Solute Cotransporters AT5G14880 77.481 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1175g00002 K03549 - gmx:100799414 1431.77