Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1170g00002 ATGAAGGGCATGTGGGATAAATGGAAACCAGCGGTGCTAATGGCGGTGGTGCAGATCACATTTGCTGCTTGCAATATACTCTACAAGCTTACCATTTATGATGGAATGAGCACTATTATTCTTTCAGCCTACCGTCTCGCATTCGCAGCGGTTACCACTATTCCTCTTGTTTTAATTTTTGAGAGGAAGAGACCAAACATGACTTGGAAGGTGTTTGGTTTGGCATTTCTCAGTGGATTGTTTGGTGGAACTTTATTTCAAAACTTATTCTACGGAGCCATGACATTGGCGCCAGCAACCTTGGTGTCCGCACTCTACAACCTTATTCCTTCCATCACCTTTATCTTGGCCATTTCCATCGGTTTCGAAAAATTAAATTGGGGAGCAGCAGCAGGAAAGGCCAAGGTGTTCGGAACTATAAGTGGACTTGTTGGGGCAATGGTGCTGGCCTTTTACAAAGGGATAGTATTTGATATTTGGCCTTTTCATTTCAACCTTTATTCATTATTGGACCAAACTGGGCACGAGAACGCTGACCCTGGTAATGAATTGTTGGGTGCTCTAAGCGTCATAACAAGTTGCTTTTGTTTCTCTGTGTGGCTGATCATTCAGGCTAAGATAAATGAAGTATATCCATGCTATTACACAAGCATAGCTTTGATGTGTACAATAGGAGCAATACAATCCATTATTTTTGGTCTTTGTGTTGAGAGGGATTTGAACCAATGGAAAATGGGTTGGGATGTCAGGCTCTTAACTGCGGCGTACTCGGGAATTATGGCCTCCGGATTTATGATCATTTTCGTTGCATATTGCATACGAGTAAGAGGCCCTTTATTTGCATCTTCTTTCAACCCTCTAATGCTTGTGCTTGTGGCTATCGTTGCTTCTTTGACGTTGGATGAGAAATTATATTTGGGAAGTGCGATTGGATCGGTGCTGATTGTGGTTGGACTATATGCGGTGCTATGGGGTAAGAGCAAAGAAATGCAAAAGATGACTCAGTCAAATCCATCAGAAACCACTGGAGATTCCGAAGCTACGAGGCCATTGCTGGATCCATGA 1065 0.4291 MKGMWDKWKPAVLMAVVQITFAACNILYKLTIYDGMSTIILSAYRLAFAAVTTIPLVLIFERKRPNMTWKVFGLAFLSGLFGGTLFQNLFYGAMTLAPATLVSALYNLIPSITFILAISIGFEKLNWGAAAGKAKVFGTISGLVGAMVLAFYKGIVFDIWPFHFNLYSLLDQTGHENADPGNELLGALSVITSCFCFSVWLIIQAKINEVYPCYYTSIALMCTIGAIQSIIFGLCVERDLNQWKMGWDVRLLTAAYSGIMASGFMIIFVAYCIRVRGPLFASSFNPLMLVLVAIVASLTLDEKLYLGSAIGSVLIVVGLYAVLWGKSKEMQKMTQSNPSETTGDSEATRPLLDP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1170g00002 354 PANTHER WAT1-RELATED PROTEIN 9 335 IPR030184 GO:0016020|GO:0022857
Gabi1170g00002 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 328 - -
Gabi1170g00002 354 Pfam EamA-like transporter family 11 134 IPR000620 GO:0016020
Gabi1170g00002 354 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Gabi1170g00002 354 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Gabi1170g00002 354 MobiDBLite consensus disorder prediction 333 354 - -
Gabi1170g00002 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1170g00002 Gabi-Chr1170 135210 145847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1170g00002 9 346 Nodulin-like Gene Family AT1G25270 40.588 9.01e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1170g00002 - - mtr:25493309 470.314