Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1168g00005 ATGGCTTGGTGCCGCATTCACTTCAACCTTAATCTCCCTTTTCCATCCGATGCGGCGTCGTTTCCGTCCACATGTCACAGTTCCTCTCACCTCTCACTCTCACTTCCTACAACTACTCCTACTCCTTCTCTCTTCAAAACAAGAAAGATCTCTTTTTCCAGTGCTTCGCGCCGTACATGTGGTGCTGTGAACTCTCACATGACCATGGAGGAGAAGCCTCTCTCTGAGAATCGAATGCTCGTGTATGTGCCTCCGCATCCGTTGATCAAGCACTGGGTTTCGGTTCTGAGGAATGAGCAAACTCCTTGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCCAGAGATTGGCTGCCCACTGTTTCTGGAGAGATTCAATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGATCCACGGGAGCCTGTGGCTGTAATTCCAATCTTGAGAGCTGGTCTTGCTCTTGCCGAACATGCATCATCAATCTTGCCTGCGACAAAAACATATCATCTAGGAATAAGCAGAGATGAGGAAACACTTCAACCAACTATATATTTGAACAAGTTGCCCGAGAAATTTGCAGAAGGATCTAAAGTATTTGTGGTTGATCCGATGTTGGCAACAGGTGGTACTATAGTGGCAGCACTAAATCTCTTAAAGGAACATGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCTCTTCAAAAGCTGAGCGAGCAGTTTCCTGGGCTTCATGTATATACTGGAATAATTGATCCAACAGTTAATGAAAAAGGGTTTATAATTCCTGGCCTTGGAGATGCCGGGGACCGCAGCTATGGTACATGA 873 0.4628 MAWCRIHFNLNLPFPSDAASFPSTCHSSSHLSLSLPTTTPTPSLFKTRKISFSSASRRTCGAVNSHMTMEEKPLSENRMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGISRDEETLQPTIYLNKLPEKFAEGSKVFVVDPMLATGGTIVAALNLLKEHGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPTVNEKGFIIPGLGDAGDRSYGT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1168g00005 290 SUPERFAMILY PRTase-like 81 289 IPR029057 -
Gabi1168g00005 290 FunFam Uracil phosphoribosyltransferase 79 290 - -
Gabi1168g00005 290 Gene3D - 68 290 IPR029057 -
Gabi1168g00005 290 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 82 267 - -
Gabi1168g00005 290 Pfam Uracil phosphoribosyltransferase 83 290 - -
Gabi1168g00005 290 NCBIfam uracil phosphoribosyltransferase 81 290 IPR005765 GO:0004845|GO:0006223
Gabi1168g00005 290 CDD PRTases_typeI 146 266 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1168g00005 Gabi-Chr1168 57322 69287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1168g00005 16 290 PRT Gene Family AT3G53900 67.626 2.18e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1168g00005 K00761 - gmx:100797537 487.263