Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1167g00004 ATGGGTATAGTTGCTGAGTCCCAGTTTCATGTTTTGGCTGTTGATGATAGTCTTATTGACAGAATGTTGATTGAAAGGCTCCTTAAAACCTCTTCCTTTCATGTTACTGTAGTGGATTCTGGTACTAAGGCTTTGAAGTTTCTTGGTTTGGTTGAAGATGAGCAGAGGAATGAAGAGCCTCCCTCTTTTGCTCCAAAAACCAATCAGAATGTAGAAGTAAACCTGATCATAACTGATTACTGCATGCCTGGAATGACAGGCTATGATCTGATGAGAAAGATCAAGGAATCTGAAATAGACATACCAGTGGTGATTATGTCATCAGAGGATGTACCATCAAGAATCAACAGATGCCTAGAAGATGGAGCTAAAGAATTTTTTCTAAAACCAGTTCAACAGTCTGATGTAAACAAACTCAAGCCCCATTTGTTGAAATCAAAAGTAAAAGATGAGGAAGACCAAGTCATCAACAAAGAAAATAACGATACAGAGGAAAGCCATTCCCCAGATGAAACCAGTTCCAGTTAA 528 0.3864 MGIVAESQFHVLAVDDSLIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVEDEQRNEEPPSFAPKTNQNVEVNLIITDYCMPGMTGYDLMRKIKESEIDIPVVIMSSEDVPSRINRCLEDGAKEFFLKPVQQSDVNKLKPHLLKSKVKDEEDQVINKENNDTEESHSPDETSSS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1167g00004 175 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 160 IPR045279 GO:0009736
Gabi1167g00004 175 Gene3D - 10 172 - -
Gabi1167g00004 175 CDD REC_typeA_ARR 11 139 - -
Gabi1167g00004 175 SUPERFAMILY CheY-like 8 140 IPR011006 -
Gabi1167g00004 175 MobiDBLite consensus disorder prediction 139 175 - -
Gabi1167g00004 175 Pfam Response regulator receiver domain 11 136 IPR001789 GO:0000160
Gabi1167g00004 175 ProSiteProfiles Response regulatory domain profile. 10 144 IPR001789 GO:0000160
Gabi1167g00004 175 SMART REC_2 9 143 IPR001789 GO:0000160
Gabi1167g00004 175 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1167g00004 Gabi-Chr1167 122045 123807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1167g00004 1 152 Response Regulator Gene Family AT3G57040 67.949 6.17e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1167g00004 Response_reg 1.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1167g00004 K14492 - gmx:100818762 263.848