Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1159g00003 ATGAGTAAGCACCCTGACCCCACTCCAATCCGTTTCTTCAAGATTATTCCTGGAACAAGTCTTCAAGAAGGAAAGCTGAGGATCCCAAAAAAATTCATTAGGAAATATGGTGGTGACATGTCAAACCCAATGTTTCTTAAGCCTCCAGATGGCACTAAATGGGAAGTATTTTGGACTGAAAATGATGGTGATATTTGGCTTCAAAAATCAAGATCTGACACAAGTGGAGGTGTGGAGAGAAGATCCACTGAGCAAAATCCGCCTCATCATGCCCAAACTGAAGGCACAAACTTTGAGAAGTCTAAGTTTGCATCTGTAAAGAAAGAATCGGATGGATTTCCTTTCCGTGGCACTCAATATGGGCAACCACCATGCCAGAACACTAGACTGAAATCACCAGTGGCTTGTCCTCAATCACGTAACAAATTGAAAACTAGCACAAGATCAGGTGATCGGTCTCAAGGGACAAACTTTGGTAAATCTAAAATGGCAGCTGTCAAGAAAGAATTGGATGAGGATGTGGATGGTACCTCCCCCAACACAAATGGAGCTCTGAAAGAAGCTGATAAATTTGCCTCAGAAAATCCCTTTTTCACAGTCAAAGTGAGGCCGGGAAGTAGACCG 624 0.4295 MSKHPDPTPIRFFKIIPGTSLQEGKLRIPKKFIRKYGGDMSNPMFLKPPDGTKWEVFWTENDGDIWLQKSRSDTSGGVERRSTEQNPPHHAQTEGTNFEKSKFASVKKESDGFPFRGTQYGQPPCQNTRLKSPVACPQSRNKLKTSTRSGDRSQGTNFGKSKMAAVKKELDEDVDGTSPNTNGALKEADKFASENPFFTVKVRPGSRP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1159g00003 208 Gene3D - 6 73 IPR015300 -
Gabi1159g00003 208 PANTHER B3 DOMAIN-CONTAINING 2 69 - -
Gabi1159g00003 208 MobiDBLite consensus disorder prediction 68 208 - -
Gabi1159g00003 208 SUPERFAMILY DNA-binding pseudobarrel domain 5 68 IPR015300 -
Gabi1159g00003 208 MobiDBLite consensus disorder prediction 120 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1159g00003 Gabi-Chr1159 19359 20320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1159g00003 12 68 B3 DNA Binding Superfamily AT3G18990 38.596 3.27e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1159g00003 - - adu:107471690 121.324