Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1156g00022 ATGGGTATCTCAAGGAAGTGGATCAAAGCATTGGTTGGTCCAAAGAGATCAGAAAAGGCAGAGTTTTCAGAGAAGGATGGAAACAAGGTTGGCAAGTTTCGCCATGAGAGAAAGCATTCCATCGAATTTGATGATAAACCTCCAAACGATTTTGATGATGATGATACTCCACATATTGGAGACGACAATGGCCATCCAAACCATGATGCCCATTATTCACCTTCTACTTCACAACAAGCACATGATGCCGCACATAATAATCAACTTAAGAGGGAGGAATTGGCTGCAATACACATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAAGCTTCAGGCCATTGTAAGAGGCCATGCAGTGAGAAAACAAGCTGCAATAACGCTCCGTTGTATGCAAGCTTTGGTAAGGGTTCAGGCTCGCGTTCGGGCAAGGCGTGTTTGCTTAGCAGTGGAAAGTCAAGCTGCAGAGCAGAAACTTCAGCAACAGCTTGCAAGCGAAGCTAGAGATCGAGAAATAGAAGGAGGATGGTGTGACAGTGTAGGATCTGTTCAAGAAATTCAGGCTAAAATATTAAAGAGACAGGAGGCTGCAGCTAGACGTGAGAGAGCCATGGTATATGCTCTAGCTCATCAGTGGCAGGCAGGACCAAGACATCAGGCTGTTTCCTCTGGATTTGAACCAGATAAACATAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGCTTTGTTGACATTAATCTGAGGGATGAAGTGAGGGTACATGAAAATGGAGCTATGGATGGTAAAAGTGGAATCAGACCTCAGTTAAGATCTGCTAACAAGAAAACATTTGCATCAAACATTCATCCCAACCCTGCAAGTCAGAGAACTGGTCCCACTCTTTCTGATGGCTGTGATTCTTCACCTAGGAAGTTAGCAGGTTTGCTAGAATCATCAAACGCACAGCCTGTTAAGCCAAATTGTAAGGCAAATGTTGGAAATCCCGTTGAAGAAGCTAACTCAAAACCTGGGATTGGGTCAAGATCTCATAGTAATCCAAAGGAGAGAACATCACAGGCAAATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACATTGGCATTCATTAA 1164 0.4407 MGISRKWIKALVGPKRSEKAEFSEKDGNKVGKFRHERKHSIEFDDKPPNDFDDDDTPHIGDDNGHPNHDAHYSPSTSQQAHDAAHNNQLKREELAAIHIQTAFRGFLARRALRALKGLVKLQAIVRGHAVRKQAAITLRCMQALVRVQARVRARRVCLAVESQAAEQKLQQQLASEARDREIEGGWCDSVGSVQEIQAKILKRQEAAARRERAMVYALAHQWQAGPRHQAVSSGFEPDKHSWGWNWLERWMAVRPWENRFVDINLRDEVRVHENGAMDGKSGIRPQLRSANKKTFASNIHPNPASQRTGPTLSDGCDSSPRKLAGLLESSNAQPVKPNCKANVGNPVEEANSKPGIGSRSHSNPKERTSQANKQAKKRLSLPNIGIH 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1156g00022 387 Pfam IQ calmodulin-binding motif 119 133 IPR000048 GO:0005515
Gabi1156g00022 387 Pfam IQ calmodulin-binding motif 95 113 IPR000048 GO:0005515
Gabi1156g00022 387 MobiDBLite consensus disorder prediction 14 68 - -
Gabi1156g00022 387 Gene3D - 91 134 - -
Gabi1156g00022 387 MobiDBLite consensus disorder prediction 295 387 - -
Gabi1156g00022 387 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Gabi1156g00022 387 MobiDBLite consensus disorder prediction 295 315 - -
Gabi1156g00022 387 MobiDBLite consensus disorder prediction 69 84 - -
Gabi1156g00022 387 SMART iq_5 91 113 IPR000048 GO:0005515
Gabi1156g00022 387 SMART iq_5 114 135 IPR000048 GO:0005515
Gabi1156g00022 387 MobiDBLite consensus disorder prediction 14 86 - -
Gabi1156g00022 387 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Gabi1156g00022 387 FunFam IQ-domain 11 91 142 - -
Gabi1156g00022 387 MobiDBLite consensus disorder prediction 355 377 - -
Gabi1156g00022 387 PANTHER IQ-DOMAIN 5-RELATED 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1156g00022 Gabi-Chr1156 169849 176593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1156g00022 1 385 IQD Protein Family AT3G22190 55.612 1.05e-118 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1156g00022 - - gmx:100781346 513.842