Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1156g00020 ATGGGTATCTCAAGGAAGTGGATCAAAGCATTGGTTGGTCCAAAGAGATCAGAAAAGGCAGAGTTTTCAGAGAAGGATGGAAACAAGGTTGGCAAGTTTCGCCATGAGAGAAAGCATTCCATCGAATTTGATGATAAACCTCCAAACGATTTTGATGATGATGATACTCCACATATTGGAGACGACAATGGCCATCCAAACCATGATGCCCATTATTCACCTTCTACTTCACAACAAGCACATGATGCCGCACATAATAATCAACTTAAGAGGGAGGAATTGGCTGCAATACACATTCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTAAAGCTTCAGGCCATTGTAAGAGGCCATGCAGTGAGAAAACAAGCTGCAATAACGCTCCGTTGTATGCAAGCTTTGGTAAGGGTTCAGGCTCGCGTTCGGGCAAGGCGTGTTTGCTTAGCAGTGGAAAGTCAAGCTGCAGAGCAGAAACTTCAGCAACAGCTTGCAAGCGAAGCTAGAGATCGAGAAATAGAAGGAGGATGGTGTGACAGTGTAGGATCTGTTCAAGAAATTCAGGCTAAAATATTAAAGAGACAGGAGGCTGCAGCTAGACGTGAGAGAGCCATGGTATATGCTCTAGCTCATCAGTGGCAGGCAGGACCAAGACATCAGGCTGTTTCCTCTGGATTTGAACCAGATAAACATAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGCTTTGTTGACATTAATCTGAGGGATGAAGTGAGGGTACATGAAAATGGAGCTATGGATGGTAAAAGTGGAATCAGACCTCAGTTAAGATCTGCTAACAAGAAAACATTTGCATCAAACATTCATCCCAACCCTGCAAGTCAGAGAACTGGTCCCACTCTTTCTGATGGCTGTGATTCTTCACCTAGGAAGTTAGCAGGTTTGCTAGAATCATCAAACGCACAGCCTGTTAAGCCAAATTGTAAGGCAAATGTTGGAAATCCCGTTGAAGAAGCTAACTCAAAACCTGGGATTGGGTCAAGATCTCATAGTAATCCAAAGGAGAGAACATCACAGGCAAATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACATTGGGGGTGGCCCTGGGTCTCAAACAGCCAGGAATCCTATTAAAACTAATGTGAAAGGGATACTAAGCACGCAAAAGCCTAGTAGGGATAAACCTAAGCTCAATGGAGTAGGGGATGTGAATCTTACAAAATCAATTGCACAGTCCACGGATATGTGA 1308 0.4427 MGISRKWIKALVGPKRSEKAEFSEKDGNKVGKFRHERKHSIEFDDKPPNDFDDDDTPHIGDDNGHPNHDAHYSPSTSQQAHDAAHNNQLKREELAAIHIQTAFRGFLARRALRALKGLVKLQAIVRGHAVRKQAAITLRCMQALVRVQARVRARRVCLAVESQAAEQKLQQQLASEARDREIEGGWCDSVGSVQEIQAKILKRQEAAARRERAMVYALAHQWQAGPRHQAVSSGFEPDKHSWGWNWLERWMAVRPWENRFVDINLRDEVRVHENGAMDGKSGIRPQLRSANKKTFASNIHPNPASQRTGPTLSDGCDSSPRKLAGLLESSNAQPVKPNCKANVGNPVEEANSKPGIGSRSHSNPKERTSQANKQAKKRLSLPNIGGGPGSQTARNPIKTNVKGILSTQKPSRDKPKLNGVGDVNLTKSIAQSTDM 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1156g00020 435 MobiDBLite consensus disorder prediction 14 68 - -
Gabi1156g00020 435 Gene3D - 92 134 - -
Gabi1156g00020 435 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Gabi1156g00020 435 MobiDBLite consensus disorder prediction 295 315 - -
Gabi1156g00020 435 PANTHER IQ-DOMAIN 5-RELATED 1 389 - -
Gabi1156g00020 435 MobiDBLite consensus disorder prediction 69 84 - -
Gabi1156g00020 435 SMART iq_5 91 113 IPR000048 GO:0005515
Gabi1156g00020 435 SMART iq_5 114 135 IPR000048 GO:0005515
Gabi1156g00020 435 MobiDBLite consensus disorder prediction 14 86 - -
Gabi1156g00020 435 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Gabi1156g00020 435 Pfam IQ calmodulin-binding motif 119 133 IPR000048 GO:0005515
Gabi1156g00020 435 Pfam IQ calmodulin-binding motif 95 113 IPR000048 GO:0005515
Gabi1156g00020 435 MobiDBLite consensus disorder prediction 385 413 - -
Gabi1156g00020 435 FunFam IQ-domain 11 91 142 - -
Gabi1156g00020 435 MobiDBLite consensus disorder prediction 295 435 - -
Gabi1156g00020 435 MobiDBLite consensus disorder prediction 355 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1156g00020 Gabi-Chr1156 169197 176593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1156g00020 1 394 IQD Protein Family AT3G22190 55.112 6.11e-120 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1156g00020 - - gmx:100787148 555.444