Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1152g00001 ATGTCGAAAACATCATTACCAAGTTTTTCATGTTATAATACAACGTTGGCATTTGCCAGCAAATTCTGGAGCACTGATGATGTCATGGAAAGGCGTGTTCCCCTTTTGACTCTCCAAATTGCCTACAATATTCTCGTTTCACGTCTTTTGTACTACCTCCTCAAGCCCCTCCATGTCCCTATTTTTGTTGCTCAGATTCTTTGTGGGGCTTTTATTTATGGACTAATCTTACCTCATGGGAGGTTTGCTGAGTTGGTGATGGAAATGACAGATGATTTTGTTACTGGGGTTCTATGCCCTATCTACTTTGCTGGTTTTGGCTTAAAAATCAACTATTTAATGATTGTGACCCAGCCAAAATGGCATTTGATGTTGCTCATTATGCTGCTGTTATCCATCCCTAAAGTTCTAAGCTCCTTAATTACAACTTTCTTCTTTGGTATGTCTGCTCGAGATGGTATAGGCATTGGATTGCTTCTCAACACTAAGGGCATCATGGCATTGATCCTGCTAAGCGTTGCCTGGGACAGAAAAATTTTGAACTTATATGATTTCACAATCATGATGCTTGGTATTATAATAATGACTGTGCTGGTATCTCCCTTGATCAATGCTACATACAAGCCAAAATTTCGATTTAAGCAATCACAGCTAAGAACTGTACAGAAGTTAAGGAGTGATGTAGTGCTTAGAGTTGTTGCTTGTGTCCACAATGCTTGCCAAGCCACCGCAATGACACATGTCCTTGAAACAGTAAATGCCACAAGAATTTCACCTTTACATGTATTTGCACTTCACCTTGTTGAACTCACTAGATATGGCACTGCTCTTCTTGTAGCCCAAATGGAACATTCAAATTCAAATGCACATGGTGGAGAACAAAAACTCTCTGAATCACAAGCAGAGTTTGAGAGCATAACCAATACATTTGACGAATTTGTAGAAGGGTACAATGCTGTTAGATTTGAGACATCAAGTGTTGTGTCAACTTATGAAACTATCCATGAAGATATATACAACGTAGCAGAAGAGAAATTTGCAAGCTTAATTATCCTTCCTTTTCACAAGGAGCTAAACTCAGAAGGTGTACTAGAAACAACTAACACTGCACAAAGTGACATAAACAAAAGTGTTCTACAACAATCACCATGTTCTGTTGTGATCTTTGTCGACCGTGGACTTGGATCATTATTACAAACAAGTTTGAGGATTGTTGTGATCTTCATTGGAGGACCGGATGATCGCGAAGCCTTATCTATAGCATGGAGAATGGCAGGGCATTCAGGAATTCAATTGGATGTGGTAAGAGTACTTTTGTTAGGTGAAGCTAAGGAAGAAGAAGAAGAAGAGAACACAATGAACAATGATGCAAATGAGTTATTATGTACAGTTAGGGATAATGGGGTACAGAAACAAATGGATGATGAGTATATATTCTCCTTCAGGCACAAGGCAATGAACAATAATGAGTCAATTGTTTATTCAGAGGAAGAAGTGCATACAGCAACAGGTGAAGAGATTCCTTTACTACTCAATGAGTTAGACAAAAATGACTATGATTTGTACATTGTTGGACAAAGTTGTGGTAGAAACTCTAGAGTTTTTTCCAAGTTGTTGGAATGGTGTGACAATCCTGAACTTGGGGTTATAGGGGATATTGTAGCTTCAACAAGCTTTGGTACACGTGCTTCATTGCTTGTTGTGCAGCAATATGATTCTGGTTCAAAGCGTAAAACTCAACATCAAAAGAAATGTCACCAAAAGAATGATGGCCCTGAGATGATGTTGTGA 1791 0.3875 MSKTSLPSFSCYNTTLAFASKFWSTDDVMERRVPLLTLQIAYNILVSRLLYYLLKPLHVPIFVAQILCGAFIYGLILPHGRFAELVMEMTDDFVTGVLCPIYFAGFGLKINYLMIVTQPKWHLMLLIMLLLSIPKVLSSLITTFFFGMSARDGIGIGLLLNTKGIMALILLSVAWDRKILNLYDFTIMMLGIIIMTVLVSPLINATYKPKFRFKQSQLRTVQKLRSDVVLRVVACVHNACQATAMTHVLETVNATRISPLHVFALHLVELTRYGTALLVAQMEHSNSNAHGGEQKLSESQAEFESITNTFDEFVEGYNAVRFETSSVVSTYETIHEDIYNVAEEKFASLIILPFHKELNSEGVLETTNTAQSDINKSVLQQSPCSVVIFVDRGLGSLLQTSLRIVVIFIGGPDDREALSIAWRMAGHSGIQLDVVRVLLLGEAKEEEEEENTMNNDANELLCTVRDNGVQKQMDDEYIFSFRHKAMNNNESIVYSEEEVHTATGEEIPLLLNELDKNDYDLYIVGQSCGRNSRVFSKLLEWCDNPELGVIGDIVASTSFGTRASLLVVQQYDSGSKRKTQHQKKCHQKNDGPEMML 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1152g00001 596 Coils Coil 443 463 - -
Gabi1152g00001 596 Gene3D - 232 544 - -
Gabi1152g00001 596 PANTHER CATION/H + ANTIPORTER 66 573 - -
Gabi1152g00001 596 Gene3D - 66 215 IPR038770 -
Gabi1152g00001 596 Pfam Sodium/hydrogen exchanger family 68 202 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi1152g00001 596 MobiDBLite consensus disorder prediction 574 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1152g00001 Gabi-Chr1152 2726 5451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1152g00001 69 571 Antiporter Super Family AT2G13620 38.583 4.67e-117 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1152g00001 - - gmx:100792990 633.254