Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1150g00007 ATGAGAATGCTACGTCTCTTCCTTTTTCTCTGCATTCTGTTTTCAATGTCACCACTGAGCGTTATGTGTCTGAACCAAGAAGGGTTATACCTCTACCAATTCAAGCTAACCCTGGATGACCCTGACTCTAGACTCTCATCGTGGAACTCAAGGGACACCACCCCTTGCAACTGGTTTGGGGTAACCTGCGACCCAACCAACACCTCCGTCACCAACCTCGACCTCTCCGAAACCAACATTGCAGGGCCGTTCCCGCCATCCATCCTCTGCCGCCTCCCAAACCTAACCTCCATCATACTCTTCAACAACTCCATCAACCAAACCCTCTCCGACCACATCACCCTCTGCAACAACCTCGTCCACCTCGACCTCTCCCAGAACCTCCTCACCGGTCCCCTCCCCAACACCTTGCCCCTCCTCCCAAACCTCAAATACCTCGACCTCACCGGCAACAACTTTTCCGGCCCTATTCCCGAATCATTCGGAACCTTCAAGAAACTTGAGGTTATGTCCCTTGTCTCGAACCTTCTAGAAGGCACCGTTCCTGCTTATCTGGGAAATGTCACCACTTTGAAAATGCTCAACCTTTCTTACAACCCGTTCTTCCCTGGTCGGATCCCGCCGGAGCTCGGGAACCTCACGAACCTGGAGGTGCTTTGGCTCACTCAGTGCAACCTCGTTGGCGTGATCCCTGACTCTCTCGGGAACCTCAAGAAGCTCAAGGACTTGGACCTCGCGCTCAACGACCTCTACGGTTCAATCCCGAGTTCGCTCACTGAGTTGACCAGTTTGGAGCAGATTGAGTTGTATAATAACTCCTTGTCCGGCGAGTTGCCTCGGGGAATGGGGAACCTCACTGCGTTGAGGCTTCTCGACGCTTCGATGAACCACTTGACGGGGAAGATTCCGGAGGAGCTGTGCTCGTTGCCACTCGAGAGCCTCAACCTCTATGAGAATCGCTTCGAGGGTGAGTTGCCGGCGAGTATAGCCAACTCGCCGAATCTCTATGAGTTGAGGTTGTTCGGGAACCGGCTCACCGGAAAGTTGCCGGCGAATCTCGGGAAGCATTCCCCTTTGAGGTGGCTTGATGTTTCGAGCAACCAGTTCTGGGGACGCATTCCGGCGACGCTGTGTGATCTTGGGGTGATGGAGGAGATTCTGATGATATACAACTTGTTCGACGGTGACATTCCGGCGAGTCTTGGCACGTGCCAGAGCTTGACGCGTGTCCGTCTCGGTTACAACCGGTTGACCGGCGAGGTTCCGGCGGGGATCTGGGGCTTGCCCCACGTGTATCTGCTTGAACTCGCTGAAAACTCTTTTTCGGGTTCCATTGCGAAGACCATTGCTGGGGCAGGGAACCTGTCATTGTTGATTTTGTCGAAGAACAACTTCACGGGAACGATTCCCGATGAGGTTGGTTGGTTGGAAAATCTTGTGGAATTTTCTGGTAGTGATAACATGTTCAGTGGTTCACTGCCTGATAGTATTGTGAATCTTGGGCAGCTTGGGATTCTTGATTTTCACAACAACAGGCTCTCTGGTGAGCTCCCAAAGGGTATTCGTTCTTTAAAGAAGCTTAATGATTTGAATTTGGCTAACAATGAGATTGGTGGGAAGATTCCTGATGAGATTGGGAGTTTGTCTGTCCTTAATTTTCTTGATCTTTCGAGAAACCAATTTACAGGGAAAGTCCCTCGGGGGTTGCAGAATCTGAAGCTAAATCAGCTCAATTTGTCTTATAATCGTCTTTCTGGGGAACTTCCCCCTCTGTTGGCTAAGGATGTGTACAAGTCTAGTTTTCTGGGTAATCCTGGTTTGTGTGGGGATTTGAAAGGCCTGTGTGATGGCAGGGGCGAAGAAAAGAGTGCGGGTTATGTTTGGTTGTTTCGAGCAATTTTCATTGTTGCCACTTTGGTGTTCCTCGGCGGTGTTGTTGGGTTCTATTTCAAGTATAAGAATTTCAAGGATGCAAAAAGGGCTATTGATAAATCAAAGTGGACTTTGATGTCGTTTCATAAACTGGGTTTTGGTGAAGATGAGATTTTGAATTGCCTTGATGAAGATAATGTGATTGGAAGTGGATCGTCGGGGAAAGTCTACAAGGTTGTACTTAGCAGTGGGGAGGCTGTAGCTGTTAAGAAGATATGGGGAGGGGTCAGGAAGGAAATAGAGAGTGGAGATGTCGAAAAGGGTAGAGTTCAGGACAATGCTTTTGATGCAGAGGTTGGAACGTTGGGCAAAATTCGGCACAAGAACATTGTCAAGCTATGGTGTTGCTGCACAACCAGGGATTGCCAGCTCTTGGTTTATGAGTATATGCCCAATGGTAGTCTTGGTGATTTGTTGCATAGCAGTAAAGGAGGGTTGTTGGATTGGCCAACCAGATACAAGATAGCTATTGATGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCCCCAATTGTTCATAGAGATGTGAAATCTAACAATATCTTGTTGGATGGGGACTTCGGTGCAAGGGTGGCAGATTTTGGGGTAGCTAAGGTAGTCGAAACTACAGGGAAAGGAACTAAATCCATGTCCATCATAGCTGGATCTTGTGGGTATATAGCACCAGAGTATGCATACACGCTTAGAGTGAATGAGAAGAGCGACATATACAGTTTTGGTGTCGTCATACTTGAGTTGGTCACTGGAAGACGTCCGGTGGACCCTGAATTTGGGGAGAAAGACTTGGTTAAGTGGGTGTGCACTACCTTGGATCAGAAAGGCGTGGATCATGTACTTGACTCCAGGCTTGATTCTTGTTTCAAAGAAGAAATTTGCAAGGTCTTCAACATTGGCCTCCTGTGCACTAGTCCTCTTCCAATCAACCGGCCTTCAATGAGAAGAGTGGTGAAGATGTTACAAGAGGTGGGCACAGAGAAGAACCAAACGAAACCTGTCAAGAAAGATGGAAAGTTATCCCCTTATTACTATGAAGATGCCTCAGATCATGGAAGTGTTGCTTAA 3003 0.4848 MRMLRLFLFLCILFSMSPLSVMCLNQEGLYLYQFKLTLDDPDSRLSSWNSRDTTPCNWFGVTCDPTNTSVTNLDLSETNIAGPFPPSILCRLPNLTSIILFNNSINQTLSDHITLCNNLVHLDLSQNLLTGPLPNTLPLLPNLKYLDLTGNNFSGPIPESFGTFKKLEVMSLVSNLLEGTVPAYLGNVTTLKMLNLSYNPFFPGRIPPELGNLTNLEVLWLTQCNLVGVIPDSLGNLKKLKDLDLALNDLYGSIPSSLTELTSLEQIELYNNSLSGELPRGMGNLTALRLLDASMNHLTGKIPEELCSLPLESLNLYENRFEGELPASIANSPNLYELRLFGNRLTGKLPANLGKHSPLRWLDVSSNQFWGRIPATLCDLGVMEEILMIYNLFDGDIPASLGTCQSLTRVRLGYNRLTGEVPAGIWGLPHVYLLELAENSFSGSIAKTIAGAGNLSLLILSKNNFTGTIPDEVGWLENLVEFSGSDNMFSGSLPDSIVNLGQLGILDFHNNRLSGELPKGIRSLKKLNDLNLANNEIGGKIPDEIGSLSVLNFLDLSRNQFTGKVPRGLQNLKLNQLNLSYNRLSGELPPLLAKDVYKSSFLGNPGLCGDLKGLCDGRGEEKSAGYVWLFRAIFIVATLVFLGGVVGFYFKYKNFKDAKRAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEAVAVKKIWGGVRKEIESGDVEKGRVQDNAFDAEVGTLGKIRHKNIVKLWCCCTTRDCQLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTGKGTKSMSIIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVLDSRLDSCFKEEICKVFNIGLLCTSPLPINRPSMRRVVKMLQEVGTEKNQTKPVKKDGKLSPYYYEDASDHGSVA 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1150g00007 1000 Pfam Protein kinase domain 688 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1150g00007 1000 Gene3D Phosphorylase Kinase; domain 1 670 773 - -
Gabi1150g00007 1000 ProSiteProfiles Protein kinase domain profile. 686 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1150g00007 1000 SUPERFAMILY L domain-like 38 391 - -
Gabi1150g00007 1000 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Gabi1150g00007 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Gabi1150g00007 1000 FunFam Receptor-like protein kinase HSL1 310 617 - -
Gabi1150g00007 1000 MobiDBLite consensus disorder prediction 974 989 - -
Gabi1150g00007 1000 SUPERFAMILY L domain-like 311 608 - -
Gabi1150g00007 1000 FunFam Leucine-rich receptor-like protein kinase family protein 206 304 - -
Gabi1150g00007 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 774 983 - -
Gabi1150g00007 1000 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Gabi1150g00007 1000 SMART LRR_typ_2 524 548 IPR003591 -
Gabi1150g00007 1000 SMART LRR_typ_2 500 523 IPR003591 -
Gabi1150g00007 1000 SMART LRR_typ_2 140 163 IPR003591 -
Gabi1150g00007 1000 SMART LRR_typ_2 261 285 IPR003591 -
Gabi1150g00007 1000 SMART LRR_typ_2 213 236 IPR003591 -
Gabi1150g00007 1000 SMART LRR_typ_2 92 116 IPR003591 -
Gabi1150g00007 1000 SMART serkin_6 686 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1150g00007 1000 SUPERFAMILY Protein kinase-like (PK-like) 682 966 IPR011009 -
Gabi1150g00007 1000 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 24 188 - -
Gabi1150g00007 1000 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Gabi1150g00007 1000 FunFam Receptor-like protein kinase HSL1 670 773 - -
Gabi1150g00007 1000 Gene3D Ribonuclease Inhibitor 261 331 IPR032675 -
Gabi1150g00007 1000 Gene3D Ribonuclease Inhibitor 189 260 IPR032675 -
Gabi1150g00007 1000 MobiDBLite consensus disorder prediction 973 1000 - -
Gabi1150g00007 1000 Pfam Leucine Rich Repeat 215 237 IPR001611 GO:0005515
Gabi1150g00007 1000 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Gabi1150g00007 1000 Gene3D Ribonuclease Inhibitor 332 617 IPR032675 -
Gabi1150g00007 1000 Gene3D Transferase(Phosphotransferase) domain 1 774 991 - -
Gabi1150g00007 1000 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 233 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1150g00007 Gabi-Chr1150 187426 191941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1150g00007 20 1000 Receptor kinase-like Gene Family AT1G28440 71.023 0.0 1422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi1150g00007 Pkinase 6.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1150g00007 - - gmx:100819887 1699.49