Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1150g00001 ATGTCATCCAAATGCAGCAAAATCCGCCACATTGTTCGGCTCCGCCAGATGCTGCGGCGGTGGCGCAACAAGGCACGCATGTCGGCGAATCGTACACCGTCCGATGTGCCAGCTGGACACGTGGCGGTTTGCGTGGGCACCAACTACACGAGATTTGTGGTGCGCGCGACGGACCTGAACCACCCCGTTTTCAAGAAGCTTCTAGTTCAAGCCGAGGAAGAGTACGGCTTCTCCAACCATGGACCCTTGGCCATCCCCTGCGACGAAGCGGTTTTCGAAGAGATTCTCCGGTTTATTTCCCGGTCCGACTCTGACAACTCCAACCGGTTCATTAATCTCGAAGATTTTCAGAAACACTGCCACGTGGGGATCAGGAACAACCTCGACTTCTGGCCCGAATCTCGACCGCTCCTCCATGGTCTACCTGACAAAACGGTTTGGTAG 444 0.5541 MSSKCSKIRHIVRLRQMLRRWRNKARMSANRTPSDVPAGHVAVCVGTNYTRFVVRATDLNHPVFKKLLVQAEEEYGFSNHGPLAIPCDEAVFEEILRFISRSDSDNSNRFINLEDFQKHCHVGIRNNLDFWPESRPLLHGLPDKTVW 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1150g00001 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 95 IPR003676 GO:0009733
Gabi1150g00001 147 Pfam Auxin responsive protein 13 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1150g00001 Gabi-Chr1150 36676 37119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1150g00001 3 146 Calmodulin-binding Proteins AT4G34750 52.632 1.71e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1150g00001 K14488 - qsa:O6P43_018667 260.766