Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1149g00009 ATGGAGAAAGTTTGTGAATTCTGCACAGCTTTGAGGCCACTTGTTTATTGTAAAGCTGATGCAGCATATCTTTGTCTATGCTGTGATGCAAAGGTCCATTTAGCAAATGCGTTGTCTGGCAGGCACTTCAGGAACCTTGTGTGTAACTCATGCAGATACCATCTTGCTTATGTTCAGTGTTTGGACCACAAAATGTTAATCTGTCGAGACTGCGATAAAAAACTGCACAATGCTTCTTTACCTCGTCATAAACGAGCCATCAAAAGTTTCATGGGTTGCCCTCCTGCTAAAGAATTTGCAACACTCTGGGGGTTTGATTTGAATGAGATTGAAAACAGTGCCAATCAGGATCAGTTTGAATCTATTTCTTGTGTTTCTGCAGACTTGGATGTGGTACAAGTCTCAGGAAAGCCTAGCATTCAAACTGGGGTCTCTTCAAAGATATCTGGGGCTAAACTTGTCAGGGGATCGAGCAGTCAGCAAGGTCAGATATTCTACGGTGGTCAAGAGCGACAAACTATTCTGCAGCAGGTTATTGATTTAAAGCGGCTTCAGCTAAATGATGAGAGTGATCGTTCTACAAAGATAATTGAGTTACAAGAAAAAGACTTATCTCCTTCAGTTTATCATACTCCCAAGAAATTGGCTGAAAAATACAATCAGCAAGCACAAAATTTCCAGGATCACGCCACTAATTTTCTGGAAAAAGACATTCCCATTTTGGAGCTGAGTCCGAAAACTTTGTGTTCGCTTTCTCAACTTGATAATTTATCTTCATCTTCAATTATAGACCTTCCATTGCACAGAGAGTTGTTCTGGACATGCAAAAGTCCACTTCAAAGTAATCAGTTGTGGTCCCAAAATATTCAAGACCTTGGGATATGCGAAGAACTTGTCTGTCAAGATGATTTCAACATACCAGATGTTGACTTAACATTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGATCCAATTAGAGCACTGCTTGGTGATAAAGATGTCTCACCCACTTCTCTAGAGAAGGATATGTCGGTTGATAAGTCAGATATCGACAATCCAAGTGCAATGGAGGTCTGA 1083 0.4035 MEKVCEFCTALRPLVYCKADAAYLCLCCDAKVHLANALSGRHFRNLVCNSCRYHLAYVQCLDHKMLICRDCDKKLHNASLPRHKRAIKSFMGCPPAKEFATLWGFDLNEIENSANQDQFESISCVSADLDVVQVSGKPSIQTGVSSKISGAKLVRGSSSQQGQIFYGGQERQTILQQVIDLKRLQLNDESDRSTKIIELQEKDLSPSVYHTPKKLAEKYNQQAQNFQDHATNFLEKDIPILELSPKTLCSLSQLDNLSSSSIIDLPLHRELFWTCKSPLQSNQLWSQNIQDLGICEELVCQDDFNIPDVDLTFQNFEELFGGDQDPIRALLGDKDVSPTSLEKDMSVDKSDIDNPSAMEV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1149g00009 360 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 316 - -
Gabi1149g00009 360 SMART bboxneu5 48 88 IPR000315 GO:0008270
Gabi1149g00009 360 SMART bboxneu5 1 47 IPR000315 GO:0008270
Gabi1149g00009 360 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
Gabi1149g00009 360 MobiDBLite consensus disorder prediction 335 360 - -
Gabi1149g00009 360 CDD Bbox1_BBX-like 4 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1149g00009 Gabi-Chr1149 191749 194619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1149g00009 1 355 C2C2-CO-like Transcription Factor Family AT1G68190 36.490 1.87e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1149g00009 - - gmx:100819787 543.888