LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi1126g00007	ATGGATACGCCCAAAGGATCCCAACCCGAAAACCCTATCGCCACATGCGCCACCATGCTCTCCCTCCACCGCTTCTCCGCTTTGCGCGACTTCGCAAGCCGCCTCCCGAGCTCCGACTGTGTCGCCAGAATCATCGCCATCGCCGACGTCCTCTCCGCCGCTGATTTCTACTCCGTCCTTAAGCTCCGCCGCGATGACGCCGGCGACCGCGACCTAACGCGGAGTCAGTTCGCGAAGCTGGCGCTCCTCCTTGACCCCACGAGCACCGACAAGTTCCCTTTCTCGGACGAAGCCCTCGCGCGAGCACGTGAGGCATGGCACGTGCTCTCCGACCCGGAAAGGCGTGCCCTTTACGACCGCGAGTTCGAACAACGAAGCGGCGGTGACCGTACAAAGGCGACGTTTTGGACCGGGTGCCCCTACTGTGGGAACCTGTACGAGTTCGAGAAGAGGTACGAGGAATGCACCTTGCTGTGCCAGAATTGCCGGAAAGCGTTTCCCGGTGTGGCGATGAAGCCGCCGGTGAAGGAGGGGGGTGAGAAAGGAGAGGACTATTGGAGCCACGAGAGTGTTCCCTTGAGGTATTATGAGGTTAAGGAGAAGGAGGATAATAACAACATGATGGGTGATGAAAATGTCAATGCTGTGTACATTTCTGATGATGATGATGATGATGTGAGAAGTGAAGGGTGTGAGAGGGTTCATCATGTTCAGGTGAATGAAACAGTGAATTTGAAAGGCAATGGGAAGCGGAGGATGAGGATTAAGACTGTGGCAAAGAAGGGTGTTTGGAACAGGAATAAAAGAAGCAAGCAGGAATGTGTTGATGCAGATAGTGAGTTGGATTTGGATGTGGAAGATGGTGAATTGGAGTTTACACAAGGAGATGGTGATGTCTTTGTTGGGGTTCGGTTCAACAAGTGA	924	0.5411	MDTPKGSQPENPIATCATMLSLHRFSALRDFASRLPSSDCVARIIAIADVLSAADFYSVLKLRRDDAGDRDLTRSQFAKLALLLDPTSTDKFPFSDEALARAREAWHVLSDPERRALYDREFEQRSGGDRTKATFWTGCPYCGNLYEFEKRYEECTLLCQNCRKAFPGVAMKPPVKEGGEKGEDYWSHESVPLRYYEVKEKEDNNNMMGDENVNAVYISDDDDDDVRSEGCERVHHVQVNETVNLKGNGKRRMRIKTVAKKGVWNRNKRSKQECVDADSELDLDVEDGELEFTQGDGDVFVGVRFNK	307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi1126g00007	307	PANTHER	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN	5	270	-	-
	Gabi1126g00007	307	Pfam	DnaJ domain	55	119	IPR001623	-
	Gabi1126g00007	307	SUPERFAMILY	Chaperone J-domain	46	122	IPR036869	-
	Gabi1126g00007	307	ProSiteProfiles	dnaJ domain profile.	55	122	IPR001623	-
	Gabi1126g00007	307	CDD	DnaJ	55	111	IPR001623	-
	Gabi1126g00007	307	Gene3D	DnaJ domain	50	134	IPR036869	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi1126g00007	Gabi-Chr1126	52659	53582	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi1126g00007	13	195	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT5G64360	31.646	1.93e-27	109

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi1126g00007	-		-	tpra:123904328	300.441