Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1126g00001 ATGGATACGCCCAAAGGATCCCAACCCCAAAACCCTATCGCCACATGCGCCACCATGCTCTCCCTCCGCCACTTCTCCGCTTTGCGCGACTTCGCAAGCCGCCTCCCGAGCTCCGACTGTGTCGCCAGAATCATCGCCATCGCCGACGTCCTCTCCGCCGCTGATTTCTACTCCGTCCTTAAGCTCCGCCGCGATGACGCCGGCGACCGCGACCTAACGCGGAGTCAGTTCGCGAAGCTGGCGCTCCTCCTTGACCCCACGAGCACCGACAAGTTCCCTTTCTCGGACGAAGCCCTCTTGCTAGCACGTGAGGCATGGCACGTGCTCTCCGACCCGGAAAGGCGTGCCCTTTACGACCGCGAGTTCGAACAACGAAGTGGCGGTGACCGTAGAAAGGCGACGTTTTGGACCGGGTGCCCCTACTGTGGGAACCTGTACGAGTTCGAGAAGAGGTACGAGGAATGCACCTTGCTGTGCCAGAATTGCCGGAAAGCGTTTCACGGTGTGGCGATGAAGCCGCCGGTGAAGGAGGGGGATGAGAAAGGAGAGGACTATTGGAGCCACGAGAGTGTTCCCTTGAGGTATTATGAGGTTAAGGAGAAGGAGGATAATAACAACATGATGGGGTTGGGGAAGATAGTGATAGAGGGGGTGAAGGGTGATGTGAGAAGTGAAGGGTGGGAGAGGGTTCATCGTGTTCAGGTGAATGAAACAGTGAATTTGCAAGGCAATGGGAAGCGGAGGATGAGGATTAAGACTGTGGCAAAGAAGGGTGTTTGGAACAGGAATAAGAGAAGCAAGAAGGAATGTGTTGATGCAGATAGTGACTTGGATTTGGATGTGGAAGATGGTGAATTGGAGTTTACACAAGGAGATGGTGATGTCTTTGTTGGGGTTCGGTTCAACAAGTGA 912 0.5482 MDTPKGSQPQNPIATCATMLSLRHFSALRDFASRLPSSDCVARIIAIADVLSAADFYSVLKLRRDDAGDRDLTRSQFAKLALLLDPTSTDKFPFSDEALLLAREAWHVLSDPERRALYDREFEQRSGGDRRKATFWTGCPYCGNLYEFEKRYEECTLLCQNCRKAFHGVAMKPPVKEGDEKGEDYWSHESVPLRYYEVKEKEDNNNMMGLGKIVIEGVKGDVRSEGWERVHRVQVNETVNLQGNGKRRMRIKTVAKKGVWNRNKRSKKECVDADSDLDLDVEDGELEFTQGDGDVFVGVRFNK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1126g00001 303 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 269 - -
Gabi1126g00001 303 SUPERFAMILY Chaperone J-domain 46 122 IPR036869 -
Gabi1126g00001 303 Pfam DnaJ domain 55 119 IPR001623 -
Gabi1126g00001 303 CDD DnaJ 55 111 IPR001623 -
Gabi1126g00001 303 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Gabi1126g00001 303 Gene3D DnaJ domain 50 134 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1126g00001 Gabi-Chr1126 12035 13039 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1126g00001 13 248 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 28.966 2.63e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1126g00001 - - tpra:123904328 299.286