Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1123g00002 ATGAACAACTCATGTGGTGATGGTTCTTCTCTTCCCACCACTTTCGTGGGTCTTCTGCTTCTTCAGTCGAGAACCAAATCCACCTCTTGCAACAACACACGTGTCTACACTTCCTCTGAGCTCCTCAGTGACTTTGCCACAAGAGAATTCAATGCCTCTCTGTGGCTTTCCCTCATTGTTATCACTACCCTTTTGCTCAGGAAACTCTTCAAGCTCTTCAGTTTGTGGCACAAGGCTAAAAACATTCCTGGGCCTCCATGTCCCTCTTTCTTTGGCCACTACAAGCTCGTTTCCCAGGAAAATTTCACCGATTTGTTGTCAGAATCCCATGAGAAGTATGGACCAATTGTTAAGCTGTGGTTAGGTCCTACTCAGCTTATTGTATCAGTTAAGGATCCAGTGCTAATTCAAGAGATGCTTATGAAGGCGGAGGATAAGCTTCCTTTTACTGGAAAAGCATTTCATCTAGCCTTTGGACAATCAAGCCTCTTTGCCCCTTCCTTTGATAAGGTGCAAAAGAGAAGGGAATTATTGGCAACTGAATTGAATGAAAGATTGGTGAAGACTGCTGATCTGATCCCTATGAAGGTTGCAGACTTTACCATAGATAAAATAGAAAACATCAGAGCCAGAGGAAGTATTGATTGTAGGTTGGTTTCTCAGCATATGGCTTTCACCATACTGGGAGCCACATTCTTTGGAGATGGCTTCTTGGCCTGGCCAAAGGCAGCAATTTATGAGGATCTGCTAATGATGATTGCTAAAGATGCTTGCTTTTGGGCTTCCTATAATGTTACTCCTTTCTGGAGACGAGGATTTTGGAGGTATCAATGCTTGTGTTCAAAGTTGAAGTGCTTAACTCAAGACATCCTTAAAGATTGCAGAAAAGGCTGCAAGTTATTTGACCACATTGATCAAAATGTACATAATGAAATTTTCAATGTAGAAATGAAATCAGTACATGATACACAATGCTGTTCTGATGATGAATTCCAAGATTACTATTTCTTTCGTGACCTTAGTGATGATCAAAATGCTAAAGAAGGACCTTGTGCGAACATCATGCGTGTGATGTTTCATGGATGTCAAACTACAGCTGCTTTAATTGCCAATGTATTGACTAGGCTTGTCATGCATCTCGAAATACAGGATAAGGTTTATTCAGAGATTTGCATGGTAGGGAGAAACCCATCGAAGTATGAGCATGAAGATATTTATAGGATGCCTTTGTTATTGGCTACAGTTTATGAATCTGCACGCCTTCTGCCCAGTGGTCCCATGCTGCAGAGGTGTTCTTTGAAACACGACTTGAGCTTTGCAACTGGTGTAACCATACCGGCTGGAGCTGTACTGGTTGCGCCTGTTCAATTGGTACAGAAGGATGAATCCAGTTGGGGATGCAATGCAAGTGATTTTAATCCATACCGATTTCTGTCTAATGGTACAAACGGATCAGGTTCTGCTGAAGAACTTTCTGATACTGGATTCAGCTCATTTGTACTAAATGATCCGAACGAAAATGCAGCATTTCTTCCTTTTGGATCTGGGACACGTGCTTGCATTGGGCAGAAATTTGTTATACAAGTTGTTGCCACATTGTTGGCAGCATTGCTGAAAATATATGAGATGAGGCTGGACTCAGGATCGGATGATGACTCAAAACCAATATTGAAGAATCATCTTCTTCAGCATCATCCTGATTCAAAGATATTATTTGTGAGAAGGGACCAGTGA 1734 0.4164 MNNSCGDGSSLPTTFVGLLLLQSRTKSTSCNNTRVYTSSELLSDFATREFNASLWLSLIVITTLLLRKLFKLFSLWHKAKNIPGPPCPSFFGHYKLVSQENFTDLLSESHEKYGPIVKLWLGPTQLIVSVKDPVLIQEMLMKAEDKLPFTGKAFHLAFGQSSLFAPSFDKVQKRRELLATELNERLVKTADLIPMKVADFTIDKIENIRARGSIDCRLVSQHMAFTILGATFFGDGFLAWPKAAIYEDLLMMIAKDACFWASYNVTPFWRRGFWRYQCLCSKLKCLTQDILKDCRKGCKLFDHIDQNVHNEIFNVEMKSVHDTQCCSDDEFQDYYFFRDLSDDQNAKEGPCANIMRVMFHGCQTTAALIANVLTRLVMHLEIQDKVYSEICMVGRNPSKYEHEDIYRMPLLLATVYESARLLPSGPMLQRCSLKHDLSFATGVTIPAGAVLVAPVQLVQKDESSWGCNASDFNPYRFLSNGTNGSGSAEELSDTGFSSFVLNDPNENAAFLPFGSGTRACIGQKFVIQVVATLLAALLKIYEMRLDSGSDDDSKPILKNHLLQHHPDSKILFVRRDQ 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1123g00002 577 PANTHER CYTOCHROME P450 FAMILY 4 63 548 - -
Gabi1123g00002 577 Pfam Cytochrome P450 83 570 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 PRINTS E-class P450 group I signature 510 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 PRINTS E-class P450 group I signature 520 543 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 PRINTS E-class P450 group I signature 369 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 SUPERFAMILY Cytochrome P450 79 575 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 513 522 IPR017972 GO:0005506|GO:0016705
Gabi1123g00002 577 PRINTS P450 superfamily signature 511 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 PRINTS P450 superfamily signature 520 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 PRINTS P450 superfamily signature 360 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1123g00002 577 CDD cytochrome_P450 114 555 - -
Gabi1123g00002 577 Gene3D Cytochrome P450 78 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1123g00002 Gabi-Chr1123 58749 81570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1123g00002 41 542 Cytochrome P450 AT1G13710 23.359 1.02e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1123g00002 - - gmx:100809563 887.871