Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi111g00002 ATGGATGAAAAGGTGGAAACACTTGAAGCGGAGTTACAACTTGTGAGAGAGCATAATAATACTCTAAGACTGATGCTTGAACTTCTGAGCAGCAAATGTACAAAGCTTTGGTCCCATCTTCAAGAGATCAACAAGGTAGAACAGATTGGCATCAGTTCAAATCAAATTGGGTCAGCATCTAAACTTTATACAAACAAGAAAGCAAGACTAGAGTTTACCACAGCAAAAAAACCATTAGAAATCTTTGTCAGAACCGACCCCAATGATGATAGTATGATAATAAAAGATGGTTATCAGTGGAGAAAGTATGGACAGAAGGTTACTAAAGACAATGCTTCACCTCGAGCTTACTTCAGGTGCTCCATGGCTCCCAGTTGCCCAGCCAAAAAAAAGGTGCAAAGATGCATACATGATAGGTCAATCCTTGTTGCAACTTATGATGGAGAGCACAACCATGATATGAGACTTTGTGAGGATGTCATGCAACAACATGACCATGGCAGCAACATCAAAATTGAAGAATATGTAAGTTCTCTAATTAAAGATCCTGACTTCACAGTAGCATTAGCTGAAGCAGTTGCCCGCACCATCACTAGTCAGCGTAAGCAACAAGGTATAAACCTCAACATGGATGTTCCAGAAGAATGA 648 0.3997 MDEKVETLEAELQLVREHNNTLRLMLELLSSKCTKLWSHLQEINKVEQIGISSNQIGSASKLYTNKKARLEFTTAKKPLEIFVRTDPNDDSMIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQRCIHDRSILVATYDGEHNHDMRLCEDVMQQHDHGSNIKIEEYVSSLIKDPDFTVALAEAVARTITSQRKQQGINLNMDVPEE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi111g00002 215 Gene3D WRKY domain 80 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi111g00002 215 SMART WRKY_cls 94 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi111g00002 215 Coils Coil 5 25 - -
Gabi111g00002 215 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 156 IPR044810 GO:0003700
Gabi111g00002 215 ProSiteProfiles WRKY domain profile. 89 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi111g00002 215 SUPERFAMILY WRKY DNA-binding domain 91 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi111g00002 215 Pfam WRKY DNA -binding domain 95 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi111g00002 Gabi-Chr111 22827 25378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi111g00002 2 200 WRKY Transcription Factor Family AT1G80840 34.317 5.68e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi111g00002 WRKY 6.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi111g00002 - - gmx:100170679 311.997