Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi111g00001 ATGGAATCAACATGCGTGGATACTTCACTCAATCTTAATGTTGTTCCTTCTTTGCACATGGCTGATAATTTGGTTGAAGAGTTGCATCGTTTAAATTGTGAGAATAAGAGACTGACTGAGAAGTTGACTCACTTGTGCGAGAGCTATCAGGCTATGCAAAAGCAATTGAGCAAATTGATGAACACAAATTTTGAACAAGACCCAACACAATCACGGAAGAGAAAAGCTGATGAGACTGAAAGTTGTATCAACATGTTTTGTGTTAGAGGAAACATTAACACTGAGTGCAGCAGCACCATAAATGATGAGGATTCGTCATTCAAAAGGCACAAGGATAATATTATCACCTCGCCTAAGTTTTCCAAGGTTCTTGTGAAGACGGAAGCATCTAATACTAGCTTATATGTGATGGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTCACCAGAGATAACCCCTCTCCTAGAGCTTATTTCAGATGCTCCTTTGCCCCAAGATGCCCGGTGAAAAAAAAGGTGCAAAGAAGCTTAGAAGACCCTACTATACTTGTTGCAACTTATGAAGGAGAGCACAACCATGGTCATGAGCGAGCTGAATTATCAATGGTCTCAAACCAAAAAGATGGACCTGTAGGGTCAGTTAATGTTTCCTCATCAGCTACACCCATTATTGGGAGTACTACAGGCCCAACTATAAGGCTTGACTTGGTCCAATCAGGATTGGTTGAGAGTGCCCAAAAGTCTTCTATCGAGAAGTTTTTGGTTCAACAAATGGCTACTTCTTTGACAAGAGATCCCAATTTCACAACAGCACTTGCCACTGCCATTTCAGGAAGAATTCTAGACCAGACTTCTGTGGCCAAGTGGTGA 873 0.4147 MESTCVDTSLNLNVVPSLHMADNLVEELHRLNCENKRLTEKLTHLCESYQAMQKQLSKLMNTNFEQDPTQSRKRKADETESCINMFCVRGNINTECSSTINDEDSSFKRHKDNIITSPKFSKVLVKTEASNTSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPRCPVKKKVQRSLEDPTILVATYEGEHNHGHERAELSMVSNQKDGPVGSVNVSSSATPIIGSTTGPTIRLDLVQSGLVESAQKSSIEKFLVQQMATSLTRDPNFTTALATAISGRILDQTSVAKW 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi111g00001 290 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 281 IPR044810 GO:0003700
Gabi111g00001 290 Gene3D WRKY domain 120 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi111g00001 290 ProSiteProfiles WRKY domain profile. 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi111g00001 290 FunFam WRKY transcription factor 40 121 198 - -
Gabi111g00001 290 SUPERFAMILY WRKY DNA-binding domain 134 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi111g00001 290 SMART WRKY_cls 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi111g00001 290 Coils Coil 21 55 - -
Gabi111g00001 290 Pfam WRKY DNA -binding domain 138 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi111g00001 Gabi-Chr111 9495 11210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi111g00001 3 289 WRKY Transcription Factor Family AT1G80840 44.695 1.21e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi111g00001 WRKY 1.8e-23 CL0274