Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1118g00003 ATGGCAGAGGGGAAGTCGATTGTAAGGAAGACAAGTATGTCTCCCAAAAGTAGTTGGATTCACTTCGATGCTAAAGGCCATGGTTCCTTACTCGACTTGGACAAGTATGATATCATGCGTCGAGTTCAGATTCATGCTCGTGATCTCAGGATTCTTGATCCATTTCTCTCTTACCCCTCTACCATTCTTGGTCGAGAAAAGGCTATTGTTCTTAACTTGGAGCATATCAAAGCAATCATCACTGCTAAAGAGGTGTTTTTGCAAGACCCAAGGGATGAAGATGTGGTGCCCGTTGTTCAGGAGCTACAACGGAGGTTGACTGCTGTTCATACAAATCAAGGAGAAGGAGAAGAGTATCCTAGCCCACACGATACTGAAATAGTTGAAGAGGATGAGCCACCCTTTGAGTTCCAAGCCCTAGAGGTAATTTTAGAAGCAATTTGTAGTTTCCTTGCTGCACGTACAACAGAAATGGAAATGGCTGCTTATCCTGCATTAGATGAACTTACCACCAAGATTTGCACTCGTAATTTGGACACAGTTCGTAAATTGAAGAGTTCCATAACGAGGCTGACTACTAGGGTTCAGAAGGTGAAAGATCAACTAGAACAATTAATGGATGATGAAGATGACATGGCTGATCTATACTTATCAAGAAAGTTGGCAGGCACATCATTGCCAATAAGTGTATCAAGAGCTGCTAATTGGTATGTTGTGTCGCCCACCATAGAACCAAAACTATCTAGGACAAGTAGAGCAAGTGTGGCAACATTTTATGAAGATGAAAATGATGTGGAGGAGCTTGAAATGTTACTAGAGGCTTATTTCATGCAAATTGATGGCACATTGAACAAATTATCCACACTACAAGGATATATTGATGATACTGAAGATTATATTAATATTCAGATTGACAACCATCGAAATCAGTTGATTCAGTTAGAGATGTTTCTTAACTCGGGAGACCTTTCTCTATCTTTCTATTCTTTGGTGACTGGAATATTTGGCATGAATTTTCCATTTTCTTGGAATCAAAACCATGGCTACTTGTTCAAATGGGTAGTTACTTTTACTGGAGTTTTTTGCACTGTTTTGTTTCTCGTCATAGTTACCCATGCTCGCAAAAAGGGGTTGGTTGGGTCATGA 1146 0.4023 MAEGKSIVRKTSMSPKSSWIHFDAKGHGSLLDLDKYDIMRRVQIHARDLRILDPFLSYPSTILGREKAIVLNLEHIKAIITAKEVFLQDPRDEDVVPVVQELQRRLTAVHTNQGEGEEYPSPHDTEIVEEDEPPFEFQALEVILEAICSFLAARTTEMEMAAYPALDELTTKICTRNLDTVRKLKSSITRLTTRVQKVKDQLEQLMDDEDDMADLYLSRKLAGTSLPISVSRAANWYVVSPTIEPKLSRTSRASVATFYEDENDVEELEMLLEAYFMQIDGTLNKLSTLQGYIDDTEDYINIQIDNHRNQLIQLEMFLNSGDLSLSFYSLVTGIFGMNFPFSWNQNHGYLFKWVVTFTGVFCTVLFLVIVTHARKKGLVGS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1118g00003 381 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 327 369 IPR045863 -
Gabi1118g00003 381 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 16 378 IPR039204 -
Gabi1118g00003 381 FunFam Magnesium transporter MRS2-5 108 311 - -
Gabi1118g00003 381 Gene3D - 5 90 - -
Gabi1118g00003 381 Coils Coil 181 215 - -
Gabi1118g00003 381 Gene3D Magnesium transport protein CorA, transmembrane region 94 311 - -
Gabi1118g00003 381 CDD Mrs2_Mfm1p-like 19 378 IPR039204 -
Gabi1118g00003 381 FunFam Magnesium transporter MRS2-1 7 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1118g00003 Gabi-Chr1118 92911 134849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1118g00003 2 354 MRS2 Gene Family AT5G64560 68.436 2.36e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1118g00003 K16075 - pop:7467525 523.087