Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1107g00005 ATGGAATGTGAAAGCAAAGGAAAATTGGCGAGGGTGGTAGAATTTGGAGTGGGAAAAGATTACTATGTTTTGAAATCCAAAATCGGAGAGGGTTCTTTCTCAACAGTGTGGAAAGCGGAGCAGAGACCAAGATGTGAAGAGGTGGCGGTGAAACAGGTTTTTCTCTCCAAACTAAACCGTCACCTCAAAGATTGCTTGGACTGCGAGATCAATTTCTTGTCCTCTGTTAAACATCCCAATATTATTCGCCTTCTCCACTTCTTCCAGGCTGATCAATGTGTGTACCTGGTCATGGAGTTTTGTGCTGGAGGGAATTTGGCTTCTTATATTCGATGCCATGGGAGAGTTCAACAACAAACAGCTAAAAAATTCATGCAGCAGCTTGGCTCTGGTCTACAAGTATTACACTCTCACGGCATCATCCATAGAGACTTGAAACCTGAGTTTTTGAATTTGAAGAAGCAGAATAAAGGCAAAGGCCATAGTGATCAGCCCATTGCATTGACAGATTCGGACAAGCAGCCCATGACAGTAAATGTGCAGGCCATGGCAGATTCGTTGGGTGATCAACATCAGCCCATTGCTTCTTCGGGTGGCCAAGGCTTGGTGAAACAGATAGTGCTGGCTGTTGAGAAGAAAAGCACTGCAAGAGAGTTTGTTATAAAAGAGCACACGTGGCAAGCGTTGAATGGGGCATACCATGTGGGAGGGGAATGGGAGAAGGGAATCAGTGGCTAA 738 0.4512 MECESKGKLARVVEFGVGKDYYVLKSKIGEGSFSTVWKAEQRPRCEEVAVKQVFLSKLNRHLKDCLDCEINFLSSVKHPNIIRLLHFFQADQCVYLVMEFCAGGNLASYIRCHGRVQQQTAKKFMQQLGSGLQVLHSHGIIHRDLKPEFLNLKKQNKGKGHSDQPIALTDSDKQPMTVNVQAMADSLGDQHQPIASSGGQGLVKQIVLAVEKKSTAREFVIKEHTWQALNGAYHVGGEWEKGISG 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1107g00005 245 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 20 148 IPR045269 GO:0004674|GO:0006914
Gabi1107g00005 245 Pfam Protein kinase domain 22 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1107g00005 245 SUPERFAMILY Protein kinase-like (PK-like) 13 148 IPR011009 -
Gabi1107g00005 245 Gene3D Transferase(Phosphotransferase) domain 1 17 171 - -
Gabi1107g00005 245 ProSiteProfiles Protein kinase domain profile. 22 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1107g00005 245 FunFam Aurora kinase A 16 104 - -
Gabi1107g00005 245 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1107g00005 Gabi-Chr1107 96161 98003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1107g00005 17 159 CBL-interacting serine-threonine protein kinases AT4G24400 37.500 1.11e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gabi1107g00005 Pkinase 6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1107g00005 - - lja:Lj1g3v1289070.2 245.358