Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1107g00001 ATGGCTGCCATGAACTCTAGCGTATTGGCTTGTAGCTATGCCATATCGGGTTCAGGATGTTCTGAGCTCAATTCGAAGCTCACTTCCGTGTCCTTGGTTGCATCACCATCGGTCTCTGGTTACAAGTTGCCCATGATCAAGGCCCAAAAGGCCATAGTTCCAAAAGCCGAAGAATCTCAAGCAAGTGAAGGAAGGAGAAATGCCCTTTTTCTCTTGGCAGCTACCCTTTTCACCACAGCAGCCGCAGCCTCCAATTCTTCAGCCAATGCTGGAGTCATTGAAGAATACCTTGAAAAGAGCAAGGCCAACAAGGAATTGAATGACAAGAAGAGGCTAGCTACTAGTGGAGCAAACTTTGCAAGAGCGTACACCGTGCAATTCGGCACTTGCAAGTTCCCTGAGAACTTCACTGGTTGTCAAGATCTTGCCAAACAAAAGAAAGTCCCATTCATTTCTGATGATTTGGAACTTGAATGCGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGA 528 0.4583 MAAMNSSVLACSYAISGSGCSELNSKLTSVSLVASPSVSGYKLPMIKAQKAIVPKAEESQASEGRRNALFLLAATLFTTAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1107g00001 175 Gene3D - 91 175 IPR044907 -
Gabi1107g00001 175 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 175 IPR008796 GO:0009522|GO:0015979
Gabi1107g00001 175 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 175 IPR008796 GO:0009522|GO:0015979
Gabi1107g00001 175 FunFam Photosystem I reaction center subunit N 91 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1107g00001 Gabi-Chr1107 57236 58948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1107g00001 1 146 Calmodulin-binding Proteins AT5G64040 67.333 2.91e-62 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1107g00001 K02701 - cave:132166062 265.003