Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1106g00015 ATGGCGGCCGCTCCCACGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTTGCCGAGCAAGCCGAGCGCTATGAAGAAATGGTGGAGTTCATGGAGAAGGTCTCCGCCGCCGCTGACAACGAGGAGCTCACGGTGGAGGAGAGGAATCTCCTCTCCGTCGCGTATAAGAACGTCATCGGAGCCCGACGCGCCTCCTGGCGCATCATCTCCTCCATCGAACAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCTCTGTTATCCGCGACTACAGATCCAAGATCGAGTCTGAGCTCTCCAACATCTGCGACGGCATCCTCAAGCTCCTCGATACCCGCCTCATCCCTTCCGCTTCCTCTGGTGATTCCAAGGTCTTCTACCTCAAGATGAAGGGCGATTACCATAGGTACCTCGCTGAGTTCAAGACCGGCGCCGAGCGTAAGGAGGCCGCAGAGAGCACCCTCACCGCTTACAAATCTGCTCAGGACATTGCAAATTCCGAACTGCCTCCAACTCATCCAATTAGGCTCGGCCTTGCTCTGAACTTCTCTGTGTTTTACTATGAAATTCTTAACTCTCCTGATCGTGCATGCAACCTTGCAAAACAGGCTTTTGATGAAGCAATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCACCGAAACCGGATGAACAGCAGAGCTTCTTCTTAATCTCGTTGGGTACTGAGATTTTAGGTATTCATGTCTGCTATGAAATATGGATGTACTGGGCTCTTTTAGTTTGTCCTTCCATTTTTAAGTGTTTTTCAAATTGCCTATTTTCTTGA 909 0.5061 MAAAPTPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKPDEQQSFFLISLGTEILGIHVCYEIWMYWALLVCPSIFKCFSNCLFS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1106g00015 302 Coils Coil 14 41 - -
Gabi1106g00015 302 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Gabi1106g00015 302 CDD 14-3-3_plant 8 244 - -
Gabi1106g00015 302 FunFam 14-3-3 protein epsilon 5 251 - -
Gabi1106g00015 302 Pfam 14-3-3 protein 14 238 IPR023410 -
Gabi1106g00015 302 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Gabi1106g00015 302 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Gabi1106g00015 302 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Gabi1106g00015 302 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Gabi1106g00015 302 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Gabi1106g00015 302 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Gabi1106g00015 302 SMART 1433_4 8 251 IPR023410 -
Gabi1106g00015 302 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Gabi1106g00015 302 PIRSF 14-3-3 2 250 IPR000308 -
Gabi1106g00015 302 Gene3D - 2 251 IPR036815 -
Gabi1106g00015 302 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Gabi1106g00015 302 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1106g00015 Gabi-Chr1106 92136 94633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1106g00015 6 260 14-3-3 family AT1G78300 90.234 7.43e-171 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1106g00015 K06630 - gmx:100792014 499.975