Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1103g00003 ATGCATCATCTAATTCTACTCTTGGTGGTCTTTAATCTGCTGCTAGTGTTCGCAGCAAGAATCGCATACTCAATCATTTGGGTCCCATGGATCATTGCACGTCACTTTCATAAACAAGGCATAAGGGGTCCCTCCTACCGTCCGATCAAAGGGAACGCGGAAGAGATTCGAAGTATGTTCGCGGAAGTTCAATCAAAGCCAATGGCTTTATGCCACGACACCCTTCAGCGCGTGTGTCCATTCTATCACAGGTGGTCTCCCATGTATGGGAAAACTGTTCTTTATTGGCACGGGTCGAAACCCAGGCTAGTCATATCCGACCCGGATATCATTAAGGAGGTCCTTTTGAAAACGGGTGAATGGTTCGAGAGGATGGACACAAATCCCTCGGTGAAACAGTTCTTTGGAAAAGGAATACTCACTTCAAAAGGTGAGTCATGGGCTACTCATAGAATGATCGCTAACCAGGCTTTTAAAGTGGAGCAAGTTAAGTCTTGGATTCCAGAAATTATAGACAGCACGAAATTGATGTTTTACAAGTGGGAAAACGAGAATAGAGGCGATGGTGAATTTGAGATTGAAGTAAATAGAGATGTCCATGATCTTTCAGCTGATATTATATCCAGAGTCGCTTTTGGAAGCAGCTATCAAGAAGGAAAAGAGATTTTCGAATTACAAGAACAACATTGCAAGCTAGTTTTCCTTGCCTCAAGAAGTGTTTATATTCCTGGGTTCAGGTTTTTACCTACCAAGAAGAATAGAGAAAGAAAGAGACTAGAGAAGAAAACCCGTGAATTAATTCGAGTGTTGATTGAGGATAGCCATAAAGCACTAAAAAATTCAGATAATTTGCTTTCTTTGTTGATTTCTTCTCACAAATCTTTCAACAATGAGACACAAACATTAGGGTTGGACGAGATAATAGATGACTGTAAAAATTTCTATATGGCGGGAAAGGAAACAAATGCGAATTCAATAAGTTGGGCACTCTTCCTTTTAGGGCTGAATCAAGAATGGCAAAGCAAGGCACGTGAGGAGGTACTTCGTGTTTTAGGACCTCATACTCCCCCAACCGCAGAAACATTAAGTGACTTGAAATTTGCGAGTTTGATAATTCAAGAAACACTTAGACTCTACGCTATGCCAGGTTCAATAGTGAGGCAAGCAAGTAAAAGAGTTAAGCTTGGGAACATTGATGTTCCTGCTGGTACACAATTATATTTGTCTATCACTGCACTTCATCATGATACTGAGTTATGGGGAGAAGATGCTCTTGAATTCAATCCTATGAGATTTACTGAGCCGAGAAAGCATTCAGCTTCGTATTTTCCCTTTGGATTGGGCCCCTACAATTGTGTGGGTCAAAATTTAGCTTTGATTGAAATGAAGATTGTTCTAGCCATGATCTTACAAAGATATTCTTTTGCTCTTTCGCCAACATATGCTCATGGACCGATCTTGTTGATGGGTGTGTCTCCTCAATATGGCATGCAAATTGTCTTTAGGAGATTGTGA 1515 0.4079 MHHLILLLVVFNLLLVFAARIAYSIIWVPWIIARHFHKQGIRGPSYRPIKGNAEEIRSMFAEVQSKPMALCHDTLQRVCPFYHRWSPMYGKTVLYWHGSKPRLVISDPDIIKEVLLKTGEWFERMDTNPSVKQFFGKGILTSKGESWATHRMIANQAFKVEQVKSWIPEIIDSTKLMFYKWENENRGDGEFEIEVNRDVHDLSADIISRVAFGSSYQEGKEIFELQEQHCKLVFLASRSVYIPGFRFLPTKKNRERKRLEKKTRELIRVLIEDSHKALKNSDNLLSLLISSHKSFNNETQTLGLDEIIDDCKNFYMAGKETNANSISWALFLLGLNQEWQSKAREEVLRVLGPHTPPTAETLSDLKFASLIIQETLRLYAMPGSIVRQASKRVKLGNIDVPAGTQLYLSITALHHDTELWGEDALEFNPMRFTEPRKHSASYFPFGLGPYNCVGQNLALIEMKIVLAMILQRYSFALSPTYAHGPILLMGVSPQYGMQIVFRRL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1103g00003 504 Gene3D Cytochrome P450 30 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 SUPERFAMILY Cytochrome P450 41 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 496 - -
Gabi1103g00003 504 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1103g00003 504 Pfam Cytochrome P450 82 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1103g00003 Gabi-Chr1103 49228 53052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1103g00003 23 504 Cytochrome P450 AT1G75130 50.928 4.88e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1103g00003 - - gmx:100789281 777.319