Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1099g00004 ATGAAGCTAGATGAGGATCTGGGTCCTGATCGGGAGGATGATTTTCAAACTGATGATGAAGAAAACCAGGCAGATAGGGTGTTTGAAACTTTGGATGATGATGATACCGAGTCAGATAACTCACCTCCTTCACGAAATTTGTCCAACGAGGCTGCCATTAGTCCCACATGGCCACAAAGTTATTGGCAATCTATGGACATGTTAACTAGTGTAACACCACCCGGAATTACTTTCCTAAGGAGAATTGGTTCAAAAGGGAGAAGTAGCTCTCTCTCTACAGCATTCCAGCGACCTCAGGAATATCAAGATGATTCTTCATTGATTATACCTCTTGTTTCCGAGACAAGTTCATCCAAACAAGAGGAACCAACCTCAACACACGTGCCATCACTTGTATCTAGCTGTACAAAATTTTCTGCTAGTGAATTGCCACCACCACAGCAGCAATGTTCATTTGCACAATCAGTATTAAATGGAACCAATATATTATGTGGGATAGGAATTGTTACCATTCCATATGCAGTAAAAGAAGGAGGGTGGTTAAGCCTTATATTACTTCTACTGTTTTCTATCATTTGCTGTTATACTGGAATTTTATTGAAGAGATGTTTAGAAAGCCACCCTGGACTCAAAACCTATCCAGATATTGGCCAAGCTGCTTTTGGATTTGCTGGTCGCCTAGGGATTGCGATCATTTTGTACATGGAACTGTTTGCTGCTTGTGTTGAGTATATAATACTAATCAGTGATAACCTCTCGTCATTGTTTCCTAACACCCACATGAGATTTGCTGGGACTGATTTTGGAACTCATCAAACTTTTGCAATCACAGCAGCTGTTCTTGTTCTACCAACAGTTTGGCTGAAAAATCTAAGCCTGCTTTCTTATATTTCAGCTGGAGGAATATTTGCAACAATACTTATTGCATTTTGCTTGTTTTGGGTTGGGGAGATACAACAAGTTGGATTTAAGCCAGGAGGAAAAGTTTTAGACATGGAAAACATATCTGTCTCAATTGGTCTCTATGCTTTTGGCTTTGCTGGCCATGCAGTTTTTCCAAACGTCTACTCTTCCATGAAGGAACCATCAAAATTCCCATCAGTTCTGTATGCCAGCTTTGCCTTTTGTCTTGTTATGTACATGAGTGTAGGAACAATTGGCTATTTAACGTTTGGTGACTCAGTTGAATCTCAGTTTCCCTTAAACATGCCAAAGGAATTATATGCATCCAAAATCGCTACCTGGACAACTGTTGTGACTCCACTGGCAAAATATGCCTTAACATTATTGCCTATTGCATTGAGCATAGAGGAACTCGCCCCTTCTCCTAGACTAAGAAGTCATGCTACTTCTGTTCTTGTCAGAACAGTTTTAGTGATTTCAAGTTTAGTTGTAGCACTCTTTGTTCCATATTTTGGTTCTTTGATGGCACTAATTGGTTCTTTTATGTCAATGTTAATTGCACTTATTTATCCTTGTGCATGTTATCTCAAGCTACATAGTGGCAGATTATCAAAAGTGCAGATAACAAGTTGCGTTTTGATTATTATTGTGGGGGCGGTATGTGCTTTTGTTGGAACACATTCAGCTGTTGCAAGAATATTTGGCGATGGGGACTGA 1620 0.3975 MKLDEDLGPDREDDFQTDDEENQADRVFETLDDDDTESDNSPPSRNLSNEAAISPTWPQSYWQSMDMLTSVTPPGITFLRRIGSKGRSSSLSTAFQRPQEYQDDSSLIIPLVSETSSSKQEEPTSTHVPSLVSSCTKFSASELPPPQQQCSFAQSVLNGTNILCGIGIVTIPYAVKEGGWLSLILLLLFSIICCYTGILLKRCLESHPGLKTYPDIGQAAFGFAGRLGIAIILYMELFAACVEYIILISDNLSSLFPNTHMRFAGTDFGTHQTFAITAAVLVLPTVWLKNLSLLSYISAGGIFATILIAFCLFWVGEIQQVGFKPGGKVLDMENISVSIGLYAFGFAGHAVFPNVYSSMKEPSKFPSVLYASFAFCLVMYMSVGTIGYLTFGDSVESQFPLNMPKELYASKIATWTTVVTPLAKYALTLLPIALSIEELAPSPRLRSHATSVLVRTVLVISSLVVALFVPYFGSLMALIGSFMSMLIALIYPCACYLKLHSGRLSKVQITSCVLIIIVGAVCAFVGTHSAVARIFGDGD 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1099g00004 539 PANTHER OS05G0424000 PROTEIN-RELATED 158 520 - -
Gabi1099g00004 539 FunFam Amino acid transporter AVT1A 148 537 - -
Gabi1099g00004 539 MobiDBLite consensus disorder prediction 10 37 - -
Gabi1099g00004 539 MobiDBLite consensus disorder prediction 1 52 - -
Gabi1099g00004 539 Pfam Transmembrane amino acid transporter protein 150 528 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1099g00004 Gabi-Chr1099 128630 132927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1099g00004 1 534 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.277 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1099g00004 K15015 - qsa:O6P43_016746 696.427