Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1095g00004 ATGGCTGAAGAAGTCAAGCATCATAACATGGTGAAGGTCATAGATCAGTGTCAAGTTAGTCCTCCTTCATCTTCTGTTCCTTCCACCTCCATTCCTCTTTCTTTCCTTGACATCCCTTGGCTTTCCTGCACTTTAATAAAAAAGATTTTCTTCTATGAGTTCCCTTATTCTACACAGCACTTCCTCCAAACAGTGGTTCCTATTCTCAAACACTCTCTTTCACTCACTCTCCAACGCTTCTTCCCCTTGGCTGCTAATGTGGCTTTCACTCGCAAACCCCACACTCCTCACATACTCTACTCCGAAGGTGACTTTGTCTCCTTCACCGTCGCAGAATCCACAGCAGATTTCACCAGCCTCGTAGTATCTGATTCCCCAAGAGATGTTAGAGATGCTTATCCACTTGTTCCCGTCCATCCTTCATCACGTACCTTAGAAGATGGCACATTGTTGCTACAAACCATGGCCATTCAGGTCACGGTTTTTGCCAACTCTGGATTCAGCATTTGCCTCAGTTTCAGACACGAAATTGCGGATGGTAGAGCTTTTGATCATTTCATGAAATTTTGGGCCACTGTTTGTAGGTCAAAAGGGGACTTCACTTCACTCGAAGGCTCTCTTCCTATGCCGTTGCACAAAAGGGACATAATTGAAGATCCAAAAGGGCTCAAGCCCATTTTCTTGGAGACGAAGTGGAATTTGCCACGGGAAAGCATAGAACACACGAGCCTTGTCCATGATGCTCCTAGCGACGACATGGTGCGTCATAGATTTATATTAAGCCGTAACCAACTTGAGAAACTAAAGAAATGGATCGCTTTCAAATGTCAAAGTATAGGTGTAGAGACATTGCACTTATCAACTTTCGTTGTGACATGTTCTTTGGTTTGGGTTTGTATTGTAAAATCAGAAGACACCAACATCGACAATGTTCCCAATAATAATGATGATTATTATTGCTGCTTGGGTTTTGCAGCAGATTGCCGTAACTTTCCCGAGTTTTCAATTCCATCATACTTTGGAAACTGCTTGAGCGCTGGCCTTGCGGCACTTATGAGGAGTAAGCTATTGGGAGAAAATGGAATTTTTGAGGCAGCGAGTGCTATTGGAAACAAAGTTAGAGATGTGCAGGGTGATCCTATGAAAGGGGTTGAAGCGTTTGGGTTAGCTAAGGAAAAAGTAGCGTTGAACGTGGAGCGTGTGTTTAAAATCGCAGGATCACCAAAGATTTATGCGTATGAGACTGACTTTGGATGGGGAAAGCCCAAGTTATATGAAATTCTTCATGCAGATGATGGTGAAACAATCTGTCTTTCTGATTGTAGGGACGAAGAAGGTGGCGTTGAAGTTGGGGTAGCATTCAAAGGAATTCAAATGAAGAAATTTAATGCCATCTTGGAAGACCAACTTAGAAATATTGCTATTCCTTATTCTGCCGTCAATTCCGCATGA 1452 0.4298 MAEEVKHHNMVKVIDQCQVSPPSSSVPSTSIPLSFLDIPWLSCTLIKKIFFYEFPYSTQHFLQTVVPILKHSLSLTLQRFFPLAANVAFTRKPHTPHILYSEGDFVSFTVAESTADFTSLVVSDSPRDVRDAYPLVPVHPSSRTLEDGTLLLQTMAIQVTVFANSGFSICLSFRHEIADGRAFDHFMKFWATVCRSKGDFTSLEGSLPMPLHKRDIIEDPKGLKPIFLETKWNLPRESIEHTSLVHDAPSDDMVRHRFILSRNQLEKLKKWIAFKCQSIGVETLHLSTFVVTCSLVWVCIVKSEDTNIDNVPNNNDDYYCCLGFAADCRNFPEFSIPSYFGNCLSAGLAALMRSKLLGENGIFEAASAIGNKVRDVQGDPMKGVEAFGLAKEKVALNVERVFKIAGSPKIYAYETDFGWGKPKLYEILHADDGETICLSDCRDEEGGVEVGVAFKGIQMKKFNAILEDQLRNIAIPYSAVNSA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1095g00004 483 PANTHER - 11 472 - -
Gabi1095g00004 483 Gene3D - 249 473 IPR023213 -
Gabi1095g00004 483 Pfam Transferase family 20 464 - -
Gabi1095g00004 483 Gene3D - 10 243 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1095g00004 Gabi-Chr1095 130922 132373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1095g00004 49 466 Monolignol Biosynthesis Gene Families AT5G48930 23.165 6.19e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1095g00004 - - gmx:100782335 531.946