Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1080g00001 ATGGAAACCTGGTTTCTGATCCTAGTTTCTTTCTGTTTCTGTGTGCTTATCAGGGCCATCCTCTGCCTTTATTCATCCACCACCAATACCAACAGCAACAAAAACAAAAGCATCAAAATCCCACCAGGACCTCCGTTCATCCCCATCATCACAACCATCTTATGGCTACGAAAACTCTCAAATCTTGAGCAAGTTCTTCGAGGCCTCCACGCCAAATATGGTCCCATCATCAGTATCCGAGTTGTCTCCCGTCCATCCATATTCATCCGCGATCGAACCCTCGCCCACCACGCCTTAATCCAAAACGGTTCTCACTTCTCCGACCGCCCCAAACCTCTTCCCACAGTAAAAGTCTTCACCAGCGAAAAACATAACTTCAGCACCGCCTCCTACGGCCCCACATGGCGCATCCTCCGCCGCAACCTCACCTCCGAGATACTTCACCACTCTCGGGTCAAATCCTTTTCCTGTGCCCGCAAGTGGGTCCTGGAAACCCTCCTCGCGCTATTGAAATCCGATTCGGAATCAAACGATTCTATACGGGTCAAGGACCACTTTCAATATGCCATGTTCTGCTTGCTTGTGTTAATGTGTTTCGGTGAAAGAGTTGACGATAAGAAAGTCAAAGACGTCGAGCGTGTCCAGCGCAAACTGCTTCTCAACCTTCATAGATTCAACATGCTAAATGTGTGGCCAAAACTCACTGCGATTTTGTTCCGCAAACGTTGGGAGGAGTTGTTGCGACTTCGTAAGGAGCAAGAAGATGTGTTCGTTCCGCTGATACGAGCGAGGAAGCAAGCTAAGGAGGGTAAAGTAAGCGATGACGTAAACGCTGTCGTTTCGTACGTGGATACTTTGTTGGATTTGGAGTTGCCTGAGGAGACACGCAAGTTGAACGAAGGGCAAATGGTTAGCTTGTGTTCGGAGTTTCTGAACGCGGGAACGGATAATACTTCCACTGCATTGCAATGGATTATGGCGAATTTGGTGAAGTACCCGCATGTGCAAGAGAAGCTTGTGGAGGAGATTAGGGAGCTGGTGGGTGATAGAGAGGAGAAGGAAGTGAAAGAGGAAGATTTGGTGAAAATGGGGTATCTCAAAGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCACCGGGGCACTTTTTGTTGCCACATGCGGTGACTGAGGATGTTGTTTTCAAAGGTTACTTGGTGCCTAAAAATGGGACTGTGAATTTCTTGGTGGCAGATATTGGGTGGGACCCAGAGGTTTGGGAAGATCCTATGGCGTTCAAACCAGAGAGGTTCTTGAACCAGAACAAGGCTCAAGTTGAGGCGTTTGATTTAACTGGAAACAAAGAGATCAAGATGATGCCGTTTGGAGCAGGGAGGAGGATGTGTCCTGGCTATAATTTGGCAATGCTCCATTTGGAATACTTTGTTGCCAATTTGGTTTGGCGTTTTGATTGGAAGGTTTCGGAAGGAGGTCATGTTGATTTGACAGAAAAAAAGGAATTCACTACGGTCATGAAAAATCCATTGCATGTTCATATTTCTCCAAGGATCTAG 1551 0.4726 METWFLILVSFCFCVLIRAILCLYSSTTNTNSNKNKSIKIPPGPPFIPIITTILWLRKLSNLEQVLRGLHAKYGPIISIRVVSRPSIFIRDRTLAHHALIQNGSHFSDRPKPLPTVKVFTSEKHNFSTASYGPTWRILRRNLTSEILHHSRVKSFSCARKWVLETLLALLKSDSESNDSIRVKDHFQYAMFCLLVLMCFGERVDDKKVKDVERVQRKLLLNLHRFNMLNVWPKLTAILFRKRWEELLRLRKEQEDVFVPLIRARKQAKEGKVSDDVNAVVSYVDTLLDLELPEETRKLNEGQMVSLCSEFLNAGTDNTSTALQWIMANLVKYPHVQEKLVEEIRELVGDREEKEVKEEDLVKMGYLKAVILEGLRRHPPGHFLLPHAVTEDVVFKGYLVPKNGTVNFLVADIGWDPEVWEDPMAFKPERFLNQNKAQVEAFDLTGNKEIKMMPFGAGRRMCPGYNLAMLHLEYFVANLVWRFDWKVSEGGHVDLTEKKEFTTVMKNPLHVHISPRI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1080g00001 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Gabi1080g00001 516 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 Coils Coil 336 356 - -
Gabi1080g00001 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 508 - -
Gabi1080g00001 516 SUPERFAMILY Cytochrome P450 41 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 FunFam Cytochrome P450 family protein 34 516 - -
Gabi1080g00001 516 CDD CYP77_89 72 509 - -
Gabi1080g00001 516 Gene3D Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1080g00001 516 Pfam Cytochrome P450 41 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1080g00001 Gabi-Chr1080 10145 11699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1080g00001 1 515 Cytochrome P450 AT1G64940 56.214 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1080g00001 K24184 - gmx:100805244 710.294