Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1077g00012 ATGGCTGGTTACTTGCCGTTTGATGAGCCAAATCAAATGGCACTGTACAAGAAAATTAGCAAGGCTGATTTCGCATGTCCATCTTGGTTTTCACCTGAGGCAAAGAAACTACTGAACTGTATTCTTGACCCAAACCCTCTTACCAGGATAAAAATTCCTGAAATCTTAGAAGATGAATGGTTCAAAAAAGGATACAAGCCAGCATCTTTTACAGAGGAAGAGGATGTAAATGTAGATGATGTAGCTGCTGCTTTCAATGATTCTAAGGAAAATCTCGTGACAGAGAGAAAAGAGAAACCCGAGTCTATGAATGCTTTTGAGCTCATTTCTAGGTCGCAAAGCTTCAATCTTGACAGCTTATTTGAGAAGCAGACAGGGATTGTAAAGCGGGAAACACATTTTACGTCACAGCGCCCTGCAAATGAAATTATGTCTAAAATTGAGGAAGCTGCCAAGCCTCTGGGCTTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAAACCGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTCGAAGTGGCTCCCTCTTTGCACATGGTTGAGCTGCGAAAGACTGGGGGTGACACACTAGAGTTTCATAAGTTCTACAAAAACTTTTCATCAGGGTTGCAAGACATAGTATGGCATCCTGAAGAAAAATAG 684 0.4152 MAGYLPFDEPNQMALYKKISKADFACPSWFSPEAKKLLNCILDPNPLTRIKIPEILEDEWFKKGYKPASFTEEEDVNVDDVAAAFNDSKENLVTERKEKPESMNAFELISRSQSFNLDSLFEKQTGIVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKTGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDIVWHPEEK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1077g00012 227 FunFam Non-specific serine/threonine protein kinase 97 223 - -
Gabi1077g00012 227 Pfam NAF domain 100 160 IPR004041 GO:0007165
Gabi1077g00012 227 CDD CIPK_C 104 217 - -
Gabi1077g00012 227 Gene3D Kinase associated domain 1, KA1 97 223 - -
Gabi1077g00012 227 Gene3D Transferase(Phosphotransferase) domain 1 1 90 - -
Gabi1077g00012 227 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 208 - -
Gabi1077g00012 227 ProSiteProfiles NAF domain profile. 98 122 IPR018451 GO:0007165
Gabi1077g00012 227 SUPERFAMILY Protein kinase-like (PK-like) 2 67 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1077g00012 Gabi-Chr1077 201924 205391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1077g00012 1 225 CBL-interacting serine-threonine protein kinases AT1G01140 71.739 2.93e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1077g00012 - - gmx:100794136 419.083