Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1077g00006 ATGGGGAAGAAGGGTAGTAGCTCGTGGTTAACTGCTGTCAAAAGAGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGGAGTAGCAAAAGAAGAGAGGACTATGATCAAGAAGAAGATGAAGAGAAGAGAGAAAAAAGAAGATGGATATTCAGAAAACCTGTGAATCATGAAACTGTGATAACACAACAAACCCCAACAAAGTTGAAGCATGATGTGGCTGAAACTACTGAAAGTGGGGCTTCAAGGAAAGACCAAGATCAAAAGCATGCGCTTGCTATGGCGGTTGCCACCGCCGAGGCTGCCATGGCCACCGCTCAGGCTGCTGTTGAGGTTGCAAGGTTGACCAAACCTGCTAGTCTTGCTAGGGAGCATTATGCTGCTACTTTGATTCAAACTGCTTTCAGAGGATATCTGGCTAGAAGAGCACTTCGTGCACTTAAGGGGTTGGTGAAGTTGCAAGCTTTAGTAAGAGGTCATAATGTTAGGAAGCAAGCAAAGATGACACTTCGGTGCATGCAGGCTTTGGTTAGAGTACAAGCAAGGGTCCTTGACCAGCGGATAAGGTCTTCTTCACTTGAAGGAAGTAGAAAATCCACTTTCAGTGACACTACTAGCGTTTGGGAATCTCGGTATCTTCAGGACATTTCAGATAGGAAATCAATATCAAGAGAGGGAAGCAGCATTGCAGATGATTGGGATGAACGTCCACACACAGTTGAAGAAGTGAAGGCCATGTTGAAGCAGAGGAAGGAAGCAGCTATGAAAAGGGACAAGTCCTTGTCCCAAGCTTTTTCTCAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGAAATGAAGATGAGCTCGAAGAGAGACCGAAATGGCTCGATCGGTGGATGGCTACGAAGCCATGGGAGAGTAGGGGAAGAGCTTCAACTGATCAAAGAGACCCCATTAAAACTGTTGAAATTGACACCTCTCAACCTTACTCATATCTTGGAACCAATTATAGAAGATCACATCCAAATTATCAGTATAACCCAAACCACCAACCACAAAGACATTCCATTGCTTCGCCACTTCACAGAACACACCAAAATGGATCAATTCACCAATCCCCTGCAACCCCTTCTCCTGCAAAATCAAGACCAATCCAAGTCCGGTCCGCAAGCCCTCGGTGTGTTAGAGAAGATAGAAGCTACCAGACCTCTCAAACACCAAGCCTGAGGTCTAATTATCATTATATAGGAAACTTGTACCAAAATGGTAGGGTTGGAACAAGTAATGGTGGTGCTGCATTGCCTAATTACATGGCAGCAACTGAATCTGCAAAGGCTCGAATTCGATCACAGAGTGCGCCGAGGCAGAGGCCAGGCACACCAGAGAGGGACAGGGTTGGATCAGCAAAGAAAAGGCTCTCTTTCCCTGCTCCTGATCCTTATAATGTAGGAGTGAATTATGGAAATTATGGACATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTTGGTGTATCACATTTTGGTTTGGAGCAGCAATCCACTTACTCTTCTTGCTGCACTGAGAGTCTTGGTGGTGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGAAGATGGTTGAGATGA 1608 0.4515 MGKKGSSSWLTAVKRAFRSPTKDSDKRSSKRREDYDQEEDEEKREKRRWIFRKPVNHETVITQQTPTKLKHDVAETTESGASRKDQDQKHALAMAVATAEAAMATAQAAVEVARLTKPASLAREHYAATLIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSSLEGSRKSTFSDTTSVWESRYLQDISDRKSISREGSSIADDWDERPHTVEEVKAMLKQRKEAAMKRDKSLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWESRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHQPQRHSIASPLHRTHQNGSIHQSPATPSPAKSRPIQVRSASPRCVREDRSYQTSQTPSLRSNYHYIGNLYQNGRVGTSNGGAALPNYMAATESAKARIRSQSAPRQRPGTPERDRVGSAKKRLSFPAPDPYNVGVNYGNYGHSLRSPSFKSVGVSHFGLEQQSTYSSCCTESLGGEVSPSSTGDLRRWLR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 513 535 - -
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 301 316 - -
Gabi1077g00006 535 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Gabi1077g00006 535 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 18 54 - -
Gabi1077g00006 535 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 301 404 - -
Gabi1077g00006 535 FunFam IQ-domain 11 123 174 - -
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 441 472 - -
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 317 380 - -
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 71 89 - -
Gabi1077g00006 535 MobiDBLite consensus disorder prediction 1 89 - -
Gabi1077g00006 535 Pfam Protein of unknown function (DUF4005) 386 484 IPR025064 -
Gabi1077g00006 535 Gene3D - 121 177 - -
Gabi1077g00006 535 Pfam IQ calmodulin-binding motif 127 145 IPR000048 GO:0005515
Gabi1077g00006 535 Pfam IQ calmodulin-binding motif 151 167 IPR000048 GO:0005515
Gabi1077g00006 535 SMART iq_5 123 145 IPR000048 GO:0005515
Gabi1077g00006 535 SMART iq_5 146 167 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1077g00006 Gabi-Chr1077 157364 160101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1077g00006 9 535 IQD Protein Family AT4G00820 57.273 4.32e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1077g00006 - - gmx:100786729 868.611