Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1077g00003 ATGGCTACCCGTATTTGTGTCTCTCTGTGGTTCTCCTATATCACAGTCCTACAACTCGTTTCCACGTTGGCTCGATCTGATAACTATATCATCCACATGGACTTATCAGCCATGCCCAAAGCATTCTCAAATCAACATAGTTGGTACCTCTCAACTCTTTCATCTGCATTAGGAAATTCTAAAGTTACTACCACCAATAATCTTAACTCTATTCCTTCTAAGCTAGTCTATTCCTACACCAATGCCATGAATGGTTTCTGTGCAAACTTGTCACCTCTAGAGCTTGAAGCTGTCAAAACCACCACGGGTTACATTTCCTCCATTATAGATTTGCCTGTGAAGCATGACACAACACACTCACCCCAATTCCTTGGCCTCAATCCCAATGCAGGGGCATGGCCTTCTTCTGATTTTGGCAAAGATGTAATCGTTGGTTTGGTGGACACTGGAGTTTGGCCAGAAAGTGAAAGCTTCAAAGATGAAGGGTTGACTAAAATACCTTCAAGATGGAAAGGTCAATGTGAAAACAGCATCCAATTCAACTCATCACTTTGCAACAAGAAACTCATTGGAGCTCGGTTCTTCAACAGAGGATTGTTAACAAAATACCACAACATCACCATAGCTGTGAACTCTACCCGTGACACAGAAGGTCACGGGACACACACATCAACCACCGCAGCAGGAAGCAAAGTTGAGGGTGCATCTTTCTTTGGCTATGCAGCTGGAACAGCAAGAGGAATAGCTTCACGTGCCAGGGTAGCTATGTACAAGGCCCTATGGGAAGATGGGGCTTTTTCATCAGATGTAATAGCTGCAATTGATAGTGCAATTTCAGATGGTGTTGATGTTCTTTCATTATCATTTGGCTTTGATGATGTACCATTGTACAATGACCCCGTTGCTATAGCCACATTTGCAGCCATGGAGAAAGGCATTTTTGTGTCTACTTCAGCAGGGAACCATGGGCCTTACCTTGAAACTCTGCATAATGGAATACCATGGGTTATAACAGTAGCTTCTGGCACTTTGGATCGTGAATTTCATGCTTCTCTTACGCTTGGCAATGGAATACAAATCAAAGGGTTGTCTTTGTATCCAGGAAACTTCTCTGCTGGTCATGTTCCTATTGTTTTTATGGGCTTGTGTGAAAATGTTAAGGAACTGAACAAAGTTAGGAACAAGATTGTGGTGTGTGAAGACAAGAATGGAAGAAGCCTTTATGATCAAGTGTCTAATGTTGGTGTGGCAAAAGTAGTAGCGGCTGTGTTCATATCAAACAGCACTGAGATTTTGCTCTTCTTACAGAATAGTTTTGCATCCATCATTATTAACCCGATGAATGGAGAGATTGTGAAAGGTTACATCAAGAGTACTAATAAATCTGGTACTTCAAAAGCAAGCATGTGTTTTAATAAGGTAACAGTTTTAGGTACAAGACCAGCACCGAGTGTGGATTGGTATAGTTCGAGAGGACCATCACAAAGTTGTCCATTTGTGTTGAAACCGGATATTACTGCTCCTGGTACATTAATCTTAGCTGCATGGCCTCAAAATGTTTTAGTACGGGGAAGTTTGGGGTCTCATGAACTCTTTAGCAATTTCAATTTGTTAAGTGGAACATCCATGGCATGTCCCCATGTTGCAGGTGTAGCTGCCCTTATTAAGGGAACATACCCTAATTGGAGCCCTGCGGCTATTAGGTCAGCTATCATGACAACCTCGGACATATTCGACAACACAATGGATTTCATCAAAGACATTGGCAGAGGTTACGAAACAGCCTCTCCTCTTGCACTTGGAGCTGGTCATGTAAATCCCAATAATGCCCTTCACCCTGGACTTGTTTATGAGGTGGGAGTACAAGATTATGTGAACCTTCTCTGTGCACTGAACTTCACGAAAAAGAACATCACCGCCATCACGAGATCCTTTTCCAACAATTGCTCCAACCCTTCATTGGATCTCAACTACCCTTCTTTTATTGCTTTCTTCAATGCCAACCATTCAGGGATAGCACAGGAATTTCATAGAACAGTGACCAATGTTGGGGAGGGACAAACGACCTATGTTGCTAGAGTTACACCCATCAAAGGGTTCCATGTCAGCATCATCCCCAACAAGTTGGTGTTCAAGAAGAAAAACGATAAGCTAAGCTACAAGTTGAGGATCAAAGGTTCCAATAAGATGAAAGAGAATAAAGTAGCTTATGGTTATCTTACTTGGGCGGACGTGAAGCATGTGGTTAGGAGCCCTATTGTGGTCACCACCTTAGAATCCAAATTCTAG 2289 0.4246 MATRICVSLWFSYITVLQLVSTLARSDNYIIHMDLSAMPKAFSNQHSWYLSTLSSALGNSKVTTTNNLNSIPSKLVYSYTNAMNGFCANLSPLELEAVKTTTGYISSIIDLPVKHDTTHSPQFLGLNPNAGAWPSSDFGKDVIVGLVDTGVWPESESFKDEGLTKIPSRWKGQCENSIQFNSSLCNKKLIGARFFNRGLLTKYHNITIAVNSTRDTEGHGTHTSTTAAGSKVEGASFFGYAAGTARGIASRARVAMYKALWEDGAFSSDVIAAIDSAISDGVDVLSLSFGFDDVPLYNDPVAIATFAAMEKGIFVSTSAGNHGPYLETLHNGIPWVITVASGTLDREFHASLTLGNGIQIKGLSLYPGNFSAGHVPIVFMGLCENVKELNKVRNKIVVCEDKNGRSLYDQVSNVGVAKVVAAVFISNSTEILLFLQNSFASIIINPMNGEIVKGYIKSTNKSGTSKASMCFNKVTVLGTRPAPSVDWYSSRGPSQSCPFVLKPDITAPGTLILAAWPQNVLVRGSLGSHELFSNFNLLSGTSMACPHVAGVAALIKGTYPNWSPAAIRSAIMTTSDIFDNTMDFIKDIGRGYETASPLALGAGHVNPNNALHPGLVYEVGVQDYVNLLCALNFTKKNITAITRSFSNNCSNPSLDLNYPSFIAFFNANHSGIAQEFHRTVTNVGEGQTTYVARVTPIKGFHVSIIPNKLVFKKKNDKLSYKLRIKGSNKMKENKVAYGYLTWADVKHVVRSPIVVTTLESKF 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1077g00003 762 Gene3D - 345 477 - -
Gabi1077g00003 762 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Gabi1077g00003 762 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Gabi1077g00003 762 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Gabi1077g00003 762 SUPERFAMILY Subtilisin-like 116 615 IPR036852 GO:0004252|GO:0006508
Gabi1077g00003 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 114 IPR037045 -
Gabi1077g00003 762 FunFam Subtilisin-like protease SBT1.5 141 354 - -
Gabi1077g00003 762 Gene3D Peptidase S8/S53 domain 141 624 IPR036852 GO:0004252|GO:0006508
Gabi1077g00003 762 CDD PA_subtilisin_like 351 459 - -
Gabi1077g00003 762 CDD Peptidases_S8_3 116 576 IPR034197 -
Gabi1077g00003 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 755 IPR045051 -
Gabi1077g00003 762 Pfam Peptidase inhibitor I9 29 108 IPR010259 -
Gabi1077g00003 762 Pfam Subtilase family 139 583 IPR000209 GO:0006508|GO:0008236
Gabi1077g00003 762 ProSiteProfiles Serine proteases, subtilase domain profile. 120 611 - -
Gabi1077g00003 762 Pfam Fibronectin type-III domain 655 755 IPR041469 -
Gabi1077g00003 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Gabi1077g00003 762 Gene3D - 628 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1077g00003 Gabi-Chr1077 43204 45515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1077g00003 1 744 Subtilisin-like Serine Gene Family AT5G67090 45.953 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1077g00003 - - gmx:100786751 1113.21