Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1075g00010 ATGCACATCACACAGTGGGACATAATGGGTTTCTCTATTTTCCACCTTATCTCATTGTTTCTTCTTTGGTCTTCCTTGCTTCAATCATCCCATGCCATTAAAATGTCTTACATTGTATACTTAGGATCACATTCTCATGGTCCAAACCCTTCAGCAAGTGAACTCGAGTCAGCAACAAATTCCCATTACAAATTATTAGGCTCACACTTGGGAAGCCATGAGAAAGCCAAAGAAGCTATATTTTACTCTTATAATAAACACATCAATGGTTTTGCTGCTGTACTTGAAGAGGAACAAGCAACAGAGATAGCAAAAAATCCAAATGTAGTGTCTGTTTTTATGAACAAAGGGCATGAACTACAAACCACAAGATCTTGGGAATTTCTTGGGCTAGAGAGTAATGGAGTGGTTCCCAAAAACTCCATTTGGGAGAAGGCAAGATGTGGTGAGGGTACAATCATTGCTAACATTGATACAGGTGTTTGGCCTGAATCTAAAAGTTTCAGTGAAGAAGGAATGAACCCTGTCCCATCAAGGTGGCGTGGGATTTGTCAACTTGATAATTTTAGCTGCAATAGGAAACTGATAGGAGCAAGATTCTTCAGCAAAGGTTATGAGTCAAAATTTGGAAAACTGAACACATCCCTTTATACAACACGTGATGTATTAAACCATGGTACCGCAACTCTGTCAATTGCTGGAGGTAACTTAGTTCAAGGAGCAAGTGTTTTTGGCTTTGGCAATGGCACTGCAAAGGGTGGTTCCCCAAGAGCCCATGTTGCAGCCTACAAGGTATGCTGGCTTGGGACCATTCAGATTGAATGCACTGATGCAGATATCATAGAAGCTTTTGAGGCTGCTATAAGTGATGGGGTTGATGTAATTTCCTGTTCCCTTGGTCATCCTACTCCTAAAGAATTTTTTGAAGATGGGGTTTCCATAGGGGCCTTTCATGCAGTTGCCAATGGTATAATAGTAGTTGCTTCTGGAGGCAATAAGGGACCAGAACCTGGAACCGTAACTAATGTGGCACCATGGGTTTTCAGTGTTGGTGCTAGCACAATAGACAGAGATTTTGCTAATTATATAGCTCTTGGTGACAAGAAGCACCTAATGGGAACTAGTCTTTCAACTGGCTTGCCATCTGAGAAGTTCTATTCTTTGATCAGTTCTGTAGATGCAAAAGTTGCTAATGCAACAATTGAAGATGCTCAAATCTGTAAGATTGGAACTCTTGATCCTAAGAAGGCAAAGGGAAAAATCTTGGTTTGTCTCCTAAGGGAGACTGTTGGATTATTTTATGCGGAGGAACAAGCTCTTTCTACAGGGGCAGTAGGACTAATTTTGGCAAATAATAAGAAACGTGGTAATGACATTATAGCATATGCTCATTTGTTGCCTACTTCACACATCAATTACACAGATAGTGAATATGTTTATTCCTACATCAAAGGCACCAAGACCCCCATGGCTTACATGACCAAAGCAAAAACTCAACTAGGAATAAAACCAGCTCCAATAATAGCTTCATTTTCATCTAGGGGACCTAACACCATCCAGGCAAATATCCTCAAGCCTGATATCACTGCACCAGGTGTGGACATTCTTTGTGCATCCTCAGAAGCTGTTAGTCCAACTAGTCTTGCATCAGATAATCGTAGGGTTCCATATAATATAGAGTCAGGAACTTCTTTTTCTTGCCCTCATGTCTCTGGCATCATTGGCCTTCTCAAAATACTTCATCCCAATCGGAGTCCTGCAGCCTTAAAATCTGCAATCATGACTACTGCAATGACACTAGATGACAACAACAGACCAATTTTGGATCAATCTAAGGAAGAAGCAACTCCATTTGCTTATGGTGCAGGACACATTCAACCAGAACTTGCAATGGACCCTGGACTTGTATATGATCTAAACACTGCTGATTAA 1932 0.4084 MHITQWDIMGFSIFHLISLFLLWSSLLQSSHAIKMSYIVYLGSHSHGPNPSASELESATNSHYKLLGSHLGSHEKAKEAIFYSYNKHINGFAAVLEEEQATEIAKNPNVVSVFMNKGHELQTTRSWEFLGLESNGVVPKNSIWEKARCGEGTIIANIDTGVWPESKSFSEEGMNPVPSRWRGICQLDNFSCNRKLIGARFFSKGYESKFGKLNTSLYTTRDVLNHGTATLSIAGGNLVQGASVFGFGNGTAKGGSPRAHVAAYKVCWLGTIQIECTDADIIEAFEAAISDGVDVISCSLGHPTPKEFFEDGVSIGAFHAVANGIIVVASGGNKGPEPGTVTNVAPWVFSVGASTIDRDFANYIALGDKKHLMGTSLSTGLPSEKFYSLISSVDAKVANATIEDAQICKIGTLDPKKAKGKILVCLLRETVGLFYAEEQALSTGAVGLILANNKKRGNDIIAYAHLLPTSHINYTDSEYVYSYIKGTKTPMAYMTKAKTQLGIKPAPIIASFSSRGPNTIQANILKPDITAPGVDILCASSEAVSPTSLASDNRRVPYNIESGTSFSCPHVSGIIGLLKILHPNRSPAALKSAIMTTAMTLDDNNRPILDQSKEEATPFAYGAGHIQPELAMDPGLVYDLNTAD 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1075g00010 643 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Gabi1075g00010 643 Gene3D Peptidase S8/S53 domain 151 643 IPR036852 GO:0004252|GO:0006508
Gabi1075g00010 643 Gene3D - 356 500 - -
Gabi1075g00010 643 SUPERFAMILY Subtilisin-like 121 635 IPR036852 GO:0004252|GO:0006508
Gabi1075g00010 643 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 121 IPR037045 -
Gabi1075g00010 643 CDD PA_subtilisin_like 362 491 - -
Gabi1075g00010 643 FunFam subtilisin-like protease SBT1.5 356 500 - -
Gabi1075g00010 643 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Gabi1075g00010 643 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Gabi1075g00010 643 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Gabi1075g00010 643 Pfam Peptidase inhibitor I9 36 116 IPR010259 -
Gabi1075g00010 643 Pfam Subtilase family 149 623 IPR000209 GO:0006508|GO:0008236
Gabi1075g00010 643 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 643 IPR045051 -
Gabi1075g00010 643 FunFam Subtilisin-like protease SBT1.5 151 367 - -
Gabi1075g00010 643 ProSiteProfiles Serine proteases, subtilase domain profile. 125 631 - -
Gabi1075g00010 643 FunFam Subtilisin-like protease SBT5.3 25 121 - -
Gabi1075g00010 643 CDD Peptidases_S8_3 118 597 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1075g00010 Gabi-Chr1075 94309 100056 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1075g00010 26 643 Subtilisin-like Serine Gene Family AT5G59810 58.158 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1075g00010 - - pcin:129318364 913.679