Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1074g00001 ATGGACAAAACAAGATATGAGAATGCCATTAAAGTCTGTGCCTTGGATAAGGATATTCATGATTTTAGCCATGGTGATCTCACAGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGAGCAGTCTACAATGATGCTGATATCTATCTTCTTGATGACCCTTTCAGTGCAGTTGATGCGCATACTGCTGCTATTCTGTTCAATGACTGTGTCATGACGGCTCTAAGAGAGAAAACAGTTATTCTAGTGACTCATCAAGTGGAGTTCCTCTCAGAAGTTGATAAAATCCTGGTAATGGAGGGTGGAAAAGTTATTCAATCAGGTAGTTATGAGGATCTCCTGACAGCTGGGACAGCCTTTGAACAACTTGTGAGTGCCCACAAAGAGACAATTTCAGAGATGGATCAAAATAATGAAAACAAAGGAGGATCTGAAAATGAGGTTGTGGCTCATCCACAGGAGTCTCATGGTTTTCATCTCACTAAAAATCAAAGTGAGGGTGAGATCTCTACCAAGGGTCAACTTGGGGTGCAGCTTACACAAGAAGAAGAAAAAGTGATTGGTAACGTTGGATGGAAGCCATTCTGGGATTATATTTCCTTTTCCAGGGGGTTATTCATGCTGTGTTTGGTCATGTTAGGACAATCTGCTTTTGTTGCTTTGCAGACTGCATCAACATATTGGCTTGCTATAGCCATTGAAATTCCAAAAATAACTAGTGGCACCTTGATTGGAGTTTACTCTTTAATTTCATTTGTTGGTGCTGCTTTTGTATATCTAAGGTCTTACCTGACTGCACTTCTTGGATTAAAGGCTTCTACAACCTTCTTCTCTAGTTTCACTACAGCTATCTTTAAGGCTCCTATGTTGTTCTTTGACTCAACCCCTATAGGGAGGATTTTAACCCGAGCTTCTTCAGATTTGAGTATTTTGGACTTTGATATACCTTATTCCATGACTTTTGTATTGTCTGTGGCAATTGAAATTCTGGTGACAATTTGTGTAATGGTTTCAGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGATTGCATCAAAATATATTCAGGGATATTATCAAGCCTCTGCAAGGGAACTAATAAGGATCAATGGAACCACAAAAGCTCCAGTCATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTAAGAGCATTCAACATGGTGGACAGATTTTTCAAAAATTACCTAAAGCTGGTGGACACAGATGCAGCACTGTTCTTTCATTCTAATGTGACCATGGAATGGTTAATTTTAAGAATTGAAGTACTTCAAAATTTGACAGTCTTCACTGCAGCTTTGTTAATTATTCTACTCCCTCAGGGATACGTGTCCCCAGGCCTTGTAGGACTTTCTCTTTCTTATGCTTTCACATTGACAGCATCCCAAGTATTTTGGACTAGATGGTTTTGCAACTTCTCAAACTATATTATCTCAGTTGAAAGAATCAAACAATTCATTAACATACCAGCCGAGCCACCTGCCATTGTGGAGGATAAAAGGCCTCCATCTTCATGGCCTTCTAAGGGTAGGATTGATCTTCAAGCCTTAGAGATTAGATATCGTCCAAATGCTCCATTAGTTCTTAAGGGTATCACTTGTACATTCAAAGAAGGGAGTAGAGTGGGAGTTGTAGGAAGGACTGGAAGTGGAAAAAGTACCCTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTGCAAGAGGTGATATTCTTATAGATGGGATTAACATAGGCTCAATGGGGTTGAAGGATTTGAGAACAAATCTAAGCATCATACCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGAACCAACTTGGACCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGAAACAATTAGCAGTCTACCAAGTCTCTTGGACTCTTCAGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGCCAACTGTTTTGTCTTGGAAGAGTACTACTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCCTCCATTGACTCTGCCACAGATGCTATTCTACAAAGAATAATTAGACAAGAATTTGCACAATGCACAGTTATAACCGTGGCTCATAGAGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGGGAAAATGTTGGAATATGATGAGCCTTCAAAGCTAATGGAAACCAATTCTTCATTCTCTAAGCTGGTTGCTGACTATTGGTCTAGCTGCAGGAAGAATTCCTCCCAAAACATTAGGAGTAGCCAGTAA 2349 0.4027 MDKTRYENAIKVCALDKDIHDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDKILVMEGGKVIQSGSYEDLLTAGTAFEQLVSAHKETISEMDQNNENKGGSENEVVAHPQESHGFHLTKNQSEGEISTKGQLGVQLTQEEEKVIGNVGWKPFWDYISFSRGLFMLCLVMLGQSAFVALQTASTYWLAIAIEIPKITSGTLIGVYSLISFVGAAFVYLRSYLTALLGLKASTTFFSSFTTAIFKAPMLFFDSTPIGRILTRASSDLSILDFDIPYSMTFVLSVAIEILVTICVMVSVTWQVLIVAVPAMIASKYIQGYYQASARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFFKNYLKLVDTDAALFFHSNVTMEWLILRIEVLQNLTVFTAALLIILLPQGYVSPGLVGLSLSYAFTLTASQVFWTRWFCNFSNYIISVERIKQFINIPAEPPAIVEDKRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPARGDILIDGINIGSMGLKDLRTNLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKETISSLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFAQCTVITVAHRVPTVIDSDMVMVLSYGKMLEYDEPSKLMETNSSFSKLVADYWSSCRKNSSQNIRSSQ 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1074g00001 782 Pfam ABC transporter 28 64 IPR003439 GO:0005524
Gabi1074g00001 782 SUPERFAMILY ABC transporter transmembrane region 202 513 IPR036640 GO:0005524|GO:0016020
Gabi1074g00001 782 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 768 - -
Gabi1074g00001 782 CDD ABCC_MRP_domain2 529 749 - -
Gabi1074g00001 782 Gene3D - 514 765 IPR027417 -
Gabi1074g00001 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 764 IPR027417 -
Gabi1074g00001 782 SMART AAA_5 557 742 IPR003593 GO:0016887
Gabi1074g00001 782 Pfam ABC transporter 548 696 IPR003439 GO:0005524
Gabi1074g00001 782 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 533 765 IPR003439 GO:0005524
Gabi1074g00001 782 FunFam ABC transporter C family member 5 180 512 - -
Gabi1074g00001 782 CDD ABC_6TM_ABCC_D2 213 506 IPR044726 GO:0140359
Gabi1074g00001 782 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 219 481 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi1074g00001 782 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 134 IPR027417 -
Gabi1074g00001 782 Gene3D - 1 159 IPR027417 -
Gabi1074g00001 782 FunFam ABC transporter C family member 3 514 765 - -
Gabi1074g00001 782 Pfam ABC transporter transmembrane region 249 480 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Gabi1074g00001 782 Gene3D ABC transporter type 1, transmembrane domain 183 512 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1074g00001 Gabi-Chr1074 8 4188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1074g00001 529 763 Calmodulin-binding Proteins AT2G36910 31.950 1.05e-29 125