Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi106g00009 ATGTGTGTTCTTATATTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTGGTGTCTTGTGTGCAAAATTTCCCCAAGAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGCTTTGCTGGGTTGAGTGGTGCTATCTTGACACAAATATATGCAATGGTACATTCCCCTGATCATGCATCCTTAATATTTATGGTTGCTGTAGGTCCAACATTGGTAGCAATAGGTCTCATGTTCATTGTTAGACCTGTTGGAGGTCACAAACAAGTTCGACCATCAGATGGAAAAAGCTTCACATTTATCTACAGTGTGTGCCTTGTATTGGCTGCTTATTTGATGGGAGTCATGGTTGTCCAAGATCTAGTTCCTCTGAGTGAAACTGTTATCACAATGTTTACAGTTATTCTCTTCATTATCCTACTTATACCAATTGTCATTCCTATCTGGTTGAGTTTTGGCTCAGAGCAAAAAACTCCAGAAGAAGAAGCACTTATTCCAGAACCACACAATAAAGAAGCAGGAAAATCTCAAATTGATGCTGATGAAGTAATATTAAGTGAGCTTGAAGATGAGAAGCCTAAGGAAGTGGACTTGCTCCCTGCATCAGAAAGGCAGAAGCGTATAGCTCAATTACAATCAAGACTACTCCAAGCTGCTGCAGAAGGAGCAGTGAGGGTCAAGAGGAGGAGAGGACCACATAGAGGAGAGGATTTTACCTTGAGACAAGCTTTGGTTAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGGTTTTAGGTTCTGGATCCGGGTTGACTGTAATTGACAATCTGGGTCAGATGAGCCAGTCTCTAGGATATGACAATACCCATATATTTGTCTCCATGATCAGTATTTGGAACTTTCTTGGCCGTGTTGGAGGGGGTTACATATCTGAGGCTGTTGTGAGGGATCATGTTTATCCAAGACCAACTGCATTGGCTGCATTTCAACTTGTTATGACTGTTGGGCATGTTTTCATTGCAATGGGATGGCCAGGGGCAATGTATGTTGGCACTTTACTTGTTGGACTTGGTTATGGGGCTCACTGGGCAATTGTTCCAGCCACTGCCTCTGAGTTGTTTGGTTTGAGAAACTTTGGTGCATTATACAATTTCATTACTCTGGCAAACCCTGTAGGAACTCTTGTCTTCTCTAGTCTCATTGCCAGCAGAATCTATGATTATGAAGCAGAGAAACAAGCTCATCTTCATCATAACCAGAACATAGGATCATTTATGTCGCGTGTGCTTCAAGTTGGTGAGCCACTAAAGTGTGAAGGTTCCATATGCTTTTTCTTGACTTCCATTATCATGGCAGGATTCTGCATTGTTGCAGCAGGCTTATGCATGGTTCTTGTATTCCGAACCAAGATTGTTTATGCCAACTTATATGGAAAATCTTCAACAAGTAGGCTTCGATAA 1446 0.4184 MCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAMVHSPDHASLIFMVAVGPTLVAIGLMFIVRPVGGHKQVRPSDGKSFTFIYSVCLVLAAYLMGVMVVQDLVPLSETVITMFTVILFIILLIPIVIPIWLSFGSEQKTPEEEALIPEPHNKEAGKSQIDADEVILSELEDEKPKEVDLLPASERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLRQALVKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYDNTHIFVSMISIWNFLGRVGGGYISEAVVRDHVYPRPTALAAFQLVMTVGHVFIAMGWPGAMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPVGTLVFSSLIASRIYDYEAEKQAHLHHNQNIGSFMSRVLQVGEPLKCEGSICFFLTSIIMAGFCIVAAGLCMVLVFRTKIVYANLYGKSSTSRLR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi106g00009 481 Gene3D MFS general substrate transporter like domains 200 409 IPR036259 -
Gabi106g00009 481 Pfam Nodulin-like 1 150 IPR010658 -
Gabi106g00009 481 SUPERFAMILY MFS general substrate transporter 100 465 IPR036259 -
Gabi106g00009 481 Coils Coil 203 223 - -
Gabi106g00009 481 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi106g00009 Gabi-Chr106 52471 56157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi106g00009 1 477 Nodulin-like Gene Family AT5G14120 70.000 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi106g00009 - - aprc:113861924 800.045