Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi106g00007 ATGGAGATCATGATGAGGATTGTATTAATGGCTACGTTTATGGCTTTTACGATTATATCTATAGGAGAAGGCCAATTAACAGAGAATTTCTATAGTTCAACTTGTCCAAACGTTGAATCCATAGTCTCCCAGGCTGTGACCACGAAGTTCACACAGACCATCACCACTGGACAAGCAACTCTGCGTTTGTTTTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCGGTGATGATTTCGTCGCCAAATGGGGATGCAGAGAAGGATGCATCGGACAATCTTTCCTTAGCTGGAGATGGGTTTGACACTGTGATAAAGGCAAAGCAAGCAGTGGAAGCTTCATGCCCTGGTGTGGTCTCATGCGCAGACATTTTGGCACTTGCTACAAGAGATGTTATTCTTAATGGCCCATCATACAAAGTAGAACTTGGACGTAGAGACGGGCTGATTTCTAAGGCATCAGATGTCGAAGGAAAACTTCCCAAAGCAGATTTCAATCTCAATGAACTGAACGCAATGTTCTCAAAGCACGGTTTGAGCCAAACGGATATGATTGCACTCTCTGGGGCCCACACCATAGGTTTCTCACATTGCGACCAGTTTTCAAACCGTTTATACTCCTCTTCTGTGGACCCTACTTTGAACTCTAACTTTGCCAAACAGTTAATGGCTGAATGCCCTCGAAACCCCGACCCCACCGTAGCGGTTGCTCTTGATTTCCAAACGCCGTCAAATTTTGATAACTTGTATTACAAAAACTTGGTTTCAGGGGAAGGGTTGCTGAATTCGGACCAAGTGTTGTTCACGGACAAGAAGTCACGGTCTACGGTGGTTGGTTTTGCGAACAGCCCTGGTGATTTTAATGGGGCCTTTGTTACGGCCATGAGGAAGCTAGGAAGGGTTGGGGTTAAGACTGGTAAAAATGGAGAGATCAGGAGAGATTGCGCGAGTTTCAATTCGTGA 963 0.4528 MEIMMRIVLMATFMAFTIISIGEGQLTENFYSSTCPNVESIVSQAVTTKFTQTITTGQATLRLFFHDCFVQGCDASVMISSPNGDAEKDASDNLSLAGDGFDTVIKAKQAVEASCPGVVSCADILALATRDVILNGPSYKVELGRRDGLISKASDVEGKLPKADFNLNELNAMFSKHGLSQTDMIALSGAHTIGFSHCDQFSNRLYSSSVDPTLNSNFAKQLMAECPRNPDPTVAVALDFQTPSNFDNLYYKNLVSGEGLLNSDQVLFTDKKSRSTVVGFANSPGDFNGAFVTAMRKLGRVGVKTGKNGEIRRDCASFNS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi106g00007 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 Gene3D - 29 319 - -
Gabi106g00007 320 PANTHER - 7 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 FunFam Peroxidase 29 172 - -
Gabi106g00007 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Gabi106g00007 320 SUPERFAMILY Heme-dependent peroxidases 25 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 FunFam Peroxidase 161 298 - -
Gabi106g00007 320 CDD secretory_peroxidase 25 318 IPR033905 GO:0004601|GO:0042744
Gabi106g00007 320 Pfam Peroxidase 43 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi106g00007 320 Gene3D Peroxidase, domain 2 161 298 - -
Gabi106g00007 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Gabi106g00007 320 ProSiteProfiles Plant heme peroxidase family profile. 25 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi106g00007 Gabi-Chr106 27640 32721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi106g00007 3 319 Peroxidase AT5G14130 60.372 8.56e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi106g00007 K00430 - gmx:100791275 487.648