Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1066g00007 ATGACACTGGAGGACAAGAGCAACCACAATAATCTCATAAGAACAGAGCAACTTGTTGAAGAGGAATCTCCATTGCTACCAAGGAAGAGAGATGAGAAGATTCAGGGGTCCAACGGTAGCGGGGCTTCCATTACTGGGTCAGTCTTCAATTTGTCAACTACCATCATTGGTGCTGGGATCATGGCCTTACCTGCAGCCATGAAAGTTCTGGGTCTGGCTTTGGGTATTGTTGCAATCATCTTCCTTGCCTTGCTCACAGAGACCTCTTTGGAGATGCTCATGAGGTTTAGCAGAGTTGGTAAAGCTGGGACTTATGGGGAGGTGATGGGGTATTCTTTTGGTAGTTTTGGAAGATTGGTGTTTCAGATATCTGTTCTTATCAACAACTTTGGGATACTTGTTGTCTACATGATCATAATTGGTGATGTGCTGTCTGGAACATCTTCGAGTGGAATTCATCATTTTGGTGTACTCGAAGGATGGTTTGGTGAATACTGGTGGACTGGGCGTACTTTTGTTCTTCTTGTGGCAACCCTTTTGGTATTTGCTCCATTGGGGTTTTTTAAGAGGATAGATTCATTGAGATATACTTCTGCTCTAGCAGTGGCTCTGGCAATTGTGTTTCTAGTCATAACTGCAGGAATCACATTTATTAAATTGTTTAATGGCAGTATAGCGAGTCCCAGGTTGCTTCCAAATATTCTAGATATTACATCTATATGGAATCTTTTTACAGCAGTTCCAGTTCTTGTGACTGCATTTGTTTGTCATTACAATGTGCATACAATAGACAATGAGCTAGGAGACTCTTCCCTGATACAATCAGTTGCACGTGCATCACTGGTTCTGTGTTCTACTATATATATTCTTACAGCCGTATTTGGATTTCTCCTATTTGGTGAGTCAACTCTGGATGATGTTTTGGCCAACTTTGATACTGATCTGGGCATCCCTTATAGCAGTCTGCTGAATGACGTTGTTCGGATTAGCTATGCCCTCCATCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCGCTACGCTTCAATTTGGATGATCTTATCTTTCCTTCAGCTAGGTCACTGGAATTAGAAAAGTGTAGGTTTGTCTTGATCACCACTGGACTCATTTCTTTACTCTATGTGGCTGCAAATTTTATACCTAGCATCTGGTATGCTTTTCAATTCACTGGAGCAACTGCCACTGTTTGCCTTGGGTTTGTTTTCCCTGCAGCAATTGCTCTGAGGGATCCCCACGGTATTGCAACAAAGAAGGACAAGATTTTATCCATTGTCATGATTTTTCTTGCTGTGTTCTCAAACGTTGTGGCTATATACAGTAACGCAGATGCCTTGTTCAGGAAACATGTTGATCCTCACCAATGA 1383 0.4194 MTLEDKSNHNNLIRTEQLVEEESPLLPRKRDEKIQGSNGSGASITGSVFNLSTTIIGAGIMALPAAMKVLGLALGIVAIIFLALLTETSLEMLMRFSRVGKAGTYGEVMGYSFGSFGRLVFQISVLINNFGILVVYMIIIGDVLSGTSSSGIHHFGVLEGWFGEYWWTGRTFVLLVATLLVFAPLGFFKRIDSLRYTSALAVALAIVFLVITAGITFIKLFNGSIASPRLLPNILDITSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSLIQSVARASLVLCSTIYILTAVFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDVVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARSLELEKCRFVLITTGLISLLYVAANFIPSIWYAFQFTGATATVCLGFVFPAAIALRDPHGIATKKDKILSIVMIFLAVFSNVVAIYSNADALFRKHVDPHQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1066g00007 460 PANTHER AMINO ACID TRANSPORTER 37 439 - -
Gabi1066g00007 460 Pfam Transmembrane amino acid transporter protein 42 446 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1066g00007 Gabi-Chr1066 185078 190613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1066g00007 23 455 Amino Acid or Auxin Permease AAAP Family AT3G30390 64.203 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1066g00007 K14207 - gmx:100778699 733.791