Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1066g00006 ATGACACTGGAGGACAAGAGCAACCACAATAATCTCATAAGAACAGAGCAACTTGTTGAAGAGGAATCTCCATTGCTACCAAGGAAGAGAGATGAGAAGATTCAGGGGTCCAACGGTAGCGGGGCTTCCATTACTGGGTCAGTCTTCAATTTGTCAACTACCATCATTGGTGCTGGGATCATGGCCTTACCTGCAGCCATGAAAGTTCTGGGTCTGGCTTTGGGTATTGTTGCAATCATCTTCCTTGCCTTGCTCACAGAGACCTCTTTGGAGATGCTCATGAGGTTTAGCAGAGTTGGTAAAGCTGGGACTTATGGGGAGGTGATGGGGTATTCTTTTGGTAGTTTTGGAAGATTGGTGTTTCAGATATCTGTTCTTATCAACAACTTTGGGATACTTGTTGTCTACATGATCATAATTGGTGATGTGCTGTCTGGAACATCTTCGAGTGGAATTCATCATTTTGGTGTACTCGAAGGATGGTTTGGTGAATACTGGTGGACTGGGCGTACTTTTGTTCTTCTTGTGGCAACCCTTTTGGTATTTGCTCCATTGGGGTTTTTTAAGAGGATAGATTCATTGAGATATACTTCTGCTCTAGCAGTGGCTCTGGCAATTGTGTTTCTAGTCATAACTGCAGGAATCACATTTATTAAATTGTTTAATGGCAGTATAGCGAGTCCCAGGTTGCTTCCAAATATTCTAGATATTACATCTATATGGAATCTTTTTACAGCAGTTCCAGTTCTTGTGACTGCATTTGTTTGTCATTACAATGTGCATACAATAGACAATGAGCTAGGAGACTCTTCCCTGATACAATCAGTTGCACGTGCATCACTGGTTCTGTGTTCTACTATATATATTCTTACAGCCGTATTTGGATTTCTCCTATTTGGTGAGTCAACTCTGGATGATGTTTTGGCCAACTTTGATACTGATCTGGGCATCCCTTATAGCAGTCTGCTGAATGACGTTGTTCGGATTAGCTATGCCCTCCATCTCATGCTTGTTTTCCCAGTTATCTTCTTCTCGCTACGCTTCAATTTGGATGATCTTATCTTTCCTTCAGCTAGGTCACTGGAATTAGAAAAGTGGATCCCCACGGTATTGCAACAAAGAAGGACAAGATTTTATCCATTGTCATGA 1149 0.4186 MTLEDKSNHNNLIRTEQLVEEESPLLPRKRDEKIQGSNGSGASITGSVFNLSTTIIGAGIMALPAAMKVLGLALGIVAIIFLALLTETSLEMLMRFSRVGKAGTYGEVMGYSFGSFGRLVFQISVLINNFGILVVYMIIIGDVLSGTSSSGIHHFGVLEGWFGEYWWTGRTFVLLVATLLVFAPLGFFKRIDSLRYTSALAVALAIVFLVITAGITFIKLFNGSIASPRLLPNILDITSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSLIQSVARASLVLCSTIYILTAVFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDVVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARSLELEKWIPTVLQQRRTRFYPLS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1066g00006 382 Pfam Transmembrane amino acid transporter protein 42 357 IPR013057 -
Gabi1066g00006 382 PANTHER AMINO ACID TRANSPORTER 37 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1066g00006 Gabi-Chr1066 185078 190613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1066g00006 23 362 Amino Acid or Auxin Permease AAAP Family AT3G30390 65.000 5.96e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1066g00006 K14207 - gmx:100778699 553.903