Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1063g00015 | ATGGCCTCCATTCCGTTGGGGCCGAACCAACCGTTGCCGCCACCACCACCGCAACAACCACCGATGCAGTTTTTGCCGCCGCTAGCTGAGAATGACCCCCCGAATGTGGAGGCTCACGGTGACTCCGAAATGGAGACTGATAAGGAAATGTCAGCTACTGTCATGGAGGGTAATGGTGAAGTCACTGGTCACATAATCTCAACCACAATTGGAGGCAAAAATGGTGAACCTAAACGGACCATCAGTTACATGGCCGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCTGTGGCTATAAAGAAGGTCCTGCAGGACAGGCGATACAAAAATCGTGAACTACAGTTAATGGGCTTGATGGATCACCCAAATATAATTTCCATGCAGAACCATTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCCGAAACGATGTCCCGAGTTCTAAAGCGCTACAATAGTATGAACCAGCGAATGCCCCTAATCTATGTGAAATTATATACATATCAAATCTTAAGAGCACTAGCATATATCCATACTGTACCAGGAGTTACCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGCGATTTTGGGAGTGCAAAAATTTTGGTCGAGGGTGAATCAAACATTTCATACATATGTTCACGATACTATCGGGCCCCCGAGCTAATATTTGGTGCGACAGAATACACAACTTCTGTTGATATCTGGTCAGCTGGCTGTGTCCTCGCCGAACTTCTTCTAGGCCAGCCATTGTTCCCAGGAGACAATCAGGTGGACCAACTTGTGGAAATTATTAAGATTCTTGGTACTCCGACTCGAGAAGAAATTCGATGTATGAACCCTAATTATACAGATTTTAGATTCCCCCAAGTTAAAGGTCATCCTTGGCATAAGGTTTTTCGAAAGCGAATGCCTCCTGAAGCAATTGACCTTGCACAAAGGCTTCTCCAATATTCACCAAGCTTACGATGCTCTGCACTGGAAGCATGCGCGCATAGGTTTTTTGATGAACTTCGTGACCCGAATGCCCGATTACCTAATGGTCGTCCACTGCCTCCGCTTTTTGACTTTACTAAACAGGAGTTAGCTGGAGCACCCCCTGAACTGATCGATAAACTCATCCCAGAGCACTTCAGGTGGCAAAGTGATCTGGACTTTCCTCTTCCGGCAGGCATATAA | 1275 | 0.4573 | MASIPLGPNQPLPPPPPQQPPMQFLPPLAENDPPNVEAHGDSEMETDKEMSATVMEGNGEVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMGLMDHPNIISMQNHFFSTTSRDELFLNLVMEYVPETMSRVLKRYNSMNQRMPLIYVKLYTYQILRALAYIHTVPGVTHRDVKPQNLLVDPLTHQVKLCDFGSAKILVEGESNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGDNQVDQLVEIIKILGTPTREEIRCMNPNYTDFRFPQVKGHPWHKVFRKRMPPEAIDLAQRLLQYSPSLRCSALEACAHRFFDELRDPNARLPNGRPLPPLFDFTKQELAGAPPELIDKLIPEHFRWQSDLDFPLPAGI | 424 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1063g00015 | 424 | ProSiteProfiles | Protein kinase domain profile. | 83 | 367 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1063g00015 | 424 | SUPERFAMILY | Protein kinase-like (PK-like) | 82 | 392 | IPR011009 | - | |
Gabi1063g00015 | 424 | FunFam | Shaggy-related protein kinase kappa | 163 | 411 | - | - | |
Gabi1063g00015 | 424 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 411 | - | - | |
Gabi1063g00015 | 424 | Pfam | Protein kinase domain | 83 | 367 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1063g00015 | 424 | FunFam | Glycogen synthase kinase-3 beta | 67 | 162 | - | - | |
Gabi1063g00015 | 424 | SMART | serkin_6 | 83 | 367 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi1063g00015 | 424 | CDD | STKc_GSK3 | 78 | 370 | IPR039192 | - | |
Gabi1063g00015 | 424 | ProSitePatterns | Protein kinases ATP-binding region signature. | 89 | 113 | IPR017441 | GO:0005524 | |
Gabi1063g00015 | 424 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 204 | 216 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi1063g00015 | 424 | Gene3D | Phosphorylase Kinase; domain 1 | 68 | 162 | - | - | |
Gabi1063g00015 | 424 | MobiDBLite | consensus disorder prediction | 7 | 28 | - | - | |
Gabi1063g00015 | 424 | PANTHER | GLYCOGEN SYNTHASE KINASE-3 ALPHA | 47 | 411 | - | - | |
Gabi1063g00015 | 424 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1063g00015 | Gabi-Chr1063 | 188782 | 194246 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1063g00015 | 89 | 370 | Core Cell Cycle Gene Families | AT3G48750 | 35.395 | 2.43e-54 | 181 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_GSK | Gabi1063g00015 | Pkinase | 2.1e-62 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi1063g00015 | K14502 | - | qsu:111995841 | 696.427 |