Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1063g00014 ATGGCCTCCATTCCGTTGGGGCCGAACCAACATCAACAACAGCTAGCAGCAGCTCCACCGCTGCCTCTACCTCTGCCTCTTCCTCTGCCGATGCCGGTGCCGGTGCCGTTACCGTTGCCGCCACCACCACCGCAACAACCACCGATGCAGTTTTTGCCGCCGCTAGCTGAGAATGACCCCCCGAATGTGGAGGCTCACGGTGACTCCGAAATGGAGACTGATAAGGAAATGTCAGCTACTGTCATGGAGGGTAATGGTGAAGTCACTGGTCACATAATCTCAACCACAATTGGAGGCAAAAATGGTGAACCTAAACGGACCATCAGTTACATGGCCGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCTGTGGCTATAAAGAAGGTCCTGCAGGACAGGCGATACAAAAATCGTGAACTACAGTTAATGGGCTTGATGGATCACCCAAATATAATTTCCATGCAGAACCATTTCTTCTCTACAACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCCGAAACGATGTCCCGAGTTCTAAAGCGCTACAATAGTATGAACCAGCGAATGCCCCTAATCTATGTGAAATTATATACATATCAAATCTTAAGAGCACTAGCATATATCCATACTGTACCAGGAGTTACCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAGCTTTGCGATTTTGGGAGTGCAAAAATTTTGGTCGAGGGTGAATCAAACATTTCATACATATGTTCACGATACTATCGGGCCCCCGAGCTAATATTTGGTGCGACAGAATACACAACTTCTGTTGATATCTGGTCAGCTGGCTGTGTCCTCGCCGAACTTCTTCTAGGCCAGCCATTGTTCCCAGGAGACAATCAGGTGGACCAACTTGTGGAAATTATTAAGATTCTTGGTACTCCGACTCGAGAAGAAATTCGATGTATGAACCCTAATTATACAGATTTTAGATTCCCCCAAGTTAAAGGTCATCCTTGGCATAAGGTTTTTCGAAAGCGAATGCCTCCTGAAGCAATTGACCTTGCACAAAGGCTTCTCCAATATTCACCAAGCTTACGATGCTCTGCACTGGAAGCATGCGCGCATAGGTTTTTTGATGAACTTCGTGACCCGAATGCCCGATTACCTAATGGTCGTCCACTGCCTCCGCTTTTTGACTTTACTAAACAGGAGTTAGCTGGAGCACCCCCTGAACTGATCGATAAACTCATCCCAGAGCACTTCAGGTGGCAAAGTGATCTGGACTTTCCTCTTCCGGCAGGCATATAA 1356 0.4668 MASIPLGPNQHQQQLAAAPPLPLPLPLPLPMPVPVPLPLPPPPPQQPPMQFLPPLAENDPPNVEAHGDSEMETDKEMSATVMEGNGEVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMGLMDHPNIISMQNHFFSTTSRDELFLNLVMEYVPETMSRVLKRYNSMNQRMPLIYVKLYTYQILRALAYIHTVPGVTHRDVKPQNLLVDPLTHQVKLCDFGSAKILVEGESNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGDNQVDQLVEIIKILGTPTREEIRCMNPNYTDFRFPQVKGHPWHKVFRKRMPPEAIDLAQRLLQYSPSLRCSALEACAHRFFDELRDPNARLPNGRPLPPLFDFTKQELAGAPPELIDKLIPEHFRWQSDLDFPLPAGI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1063g00014 451 ProSitePatterns Protein kinases ATP-binding region signature. 116 140 IPR017441 GO:0005524
Gabi1063g00014 451 Pfam Protein kinase domain 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1063g00014 451 MobiDBLite consensus disorder prediction 1 23 - -
Gabi1063g00014 451 Gene3D Transferase(Phosphotransferase) domain 1 190 438 - -
Gabi1063g00014 451 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 74 438 - -
Gabi1063g00014 451 FunFam Shaggy-related protein kinase kappa 190 438 - -
Gabi1063g00014 451 MobiDBLite consensus disorder prediction 37 69 - -
Gabi1063g00014 451 MobiDBLite consensus disorder prediction 1 16 - -
Gabi1063g00014 451 Gene3D Phosphorylase Kinase; domain 1 95 189 - -
Gabi1063g00014 451 SMART serkin_6 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1063g00014 451 FunFam Glycogen synthase kinase-3 beta 94 189 - -
Gabi1063g00014 451 SUPERFAMILY Protein kinase-like (PK-like) 109 419 IPR011009 -
Gabi1063g00014 451 MobiDBLite consensus disorder prediction 37 55 - -
Gabi1063g00014 451 ProSiteProfiles Protein kinase domain profile. 110 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1063g00014 451 CDD STKc_GSK3 105 397 IPR039192 -
Gabi1063g00014 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1063g00014 Gabi-Chr1063 188782 194343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1063g00014 116 397 Core Cell Cycle Gene Families AT3G48750 35.395 4.80e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gabi1063g00014 Pkinase 2.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1063g00014 K14502 - qsu:111995841 699.893