Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1063g00011 ATGTACCACCGTAGATTCAAGACCCAACCATTATATGCCGCTGACCCAGATGAGCCCGAGCCCGAGCCCGCCTTAGAAGCTGGGCCTGCTTCTCCTTCTTCCGGTGAAGACACAAAAACTGAAGCACCATCCCCCAAGAAAAGGAGGGAGATTAAGAAGAGGGTGGTAACTATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACATATCCACCGTCTGATTCATGGGCCTGGAGGAAGTACGGACAGAAGCCCATCAAAGGTTCCCCTTATCCCAGGGGATACTACCGATGCAGCAGTTCAAAGGGGTGTCCCGCGAGGAAGCAAGTTGAGAGAAGCCGCGTGGACCCCACAAAACTTATTGTCACCTACGCCTACGAACACAACCACTCCCTCCCTCTTCCCAAATCCCATTCCTCCTCCTCCTCCGCCGCCGCAGGCGACGGCGCTGGATCATCGCCGCCCACCGGATCCGCCTCCACTTTCCCAGCGGAGGATCTGACGGTGTTCGCGACCCACCCCGATCTCGATCTCGGCGGCGACTCTGCTGTTCTGCTCAGCCATCACCACCACGCCGAGTTCGGATGGTTCGATGACGTGGCCTCCACCGGCGGCGTTCTGGAAAGCCCGATCTGCGGGGAGGTGGACGATGTGACGATGACGATGAGGGAGGAGGACGAGTCGCTGTTCGCCGATCTCGGCGAGCTGCCGGAGTGTTTGGCGGTTTTCCGGCGGAGGAATATTCCAAGCGCTAGCGCGATTCAGTGCGGAGGCGTCACAGGATAA 795 0.5836 MYHRRFKTQPLYAADPDEPEPEPALEAGPASPSSGEDTKTEAPSPKKRREIKKRVVTIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSLPLPKSHSSSSSAAAGDGAGSSPPTGSASTFPAEDLTVFATHPDLDLGGDSAVLLSHHHHAEFGWFDDVASTGGVLESPICGEVDDVTMTMREEDESLFADLGELPECLAVFRRRNIPSASAIQCGGVTG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1063g00011 264 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 21 242 IPR044810 GO:0003700
Gabi1063g00011 264 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1063g00011 264 SUPERFAMILY WRKY DNA-binding domain 71 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi1063g00011 264 SMART WRKY_cls 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1063g00011 264 MobiDBLite consensus disorder prediction 135 164 - -
Gabi1063g00011 264 MobiDBLite consensus disorder prediction 136 164 - -
Gabi1063g00011 264 MobiDBLite consensus disorder prediction 1 87 - -
Gabi1063g00011 264 Pfam WRKY DNA -binding domain 77 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi1063g00011 264 FunFam WRKY transcription factor 65 62 136 - -
Gabi1063g00011 264 Gene3D WRKY domain 63 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1063g00011 Gabi-Chr1063 141994 144637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1063g00011 3 251 WRKY Transcription Factor Family AT3G58710 51.538 3.47e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi1063g00011 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1063g00011 - - cam:101504205 399.823