Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1060g00002 ATGAGTAAGGAAGAGGTTGCAGCCGTCAAAATGGACAAAGCTGATCAGTCTCATAAACCGGCCATCATGCGGAAGGAAAGAGTTAGCAAGAGGCAACATCAAAACAGCATTCAGAGGCAGCAGCAACAGCCTAACCCAGAGAAAAATGTTTTATCCACTTTCGTGCCTCTTCCATTGTCTGTTCCCAGTTGGCCTGGCGGGCTTCCTCCCATGGGATATATGACATCTCTGCAAGGAGTAGTATCCATGGATGGGACTAAAGTGACTTCTGCAGCTATACCGGCATTTGATGAGGCAATTTCCGAGCTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAACTTCTGTGA 366 0.4672 MSKEEVAAVKMDKADQSHKPAIMRKERVSKRQHQNSIQRQQQQPNPEKNVLSTFVPLPLSVPSWPGGLPPMGYMTSLQGVVSMDGTKVTSAAIPAFDEAISELDTLGEESYKDSTLIMQLL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1060g00002 121 MobiDBLite consensus disorder prediction 1 33 - -
Gabi1060g00002 121 PANTHER PROTEIN TIME FOR COFFEE 8 94 IPR039317 GO:0042752
Gabi1060g00002 121 MobiDBLite consensus disorder prediction 1 48 - -
Gabi1060g00002 121 PRINTS 14-3-3 protein zeta signature 102 121 IPR000308 -
Gabi1060g00002 121 PRINTS 14-3-3 protein zeta signature 75 101 IPR000308 -
Gabi1060g00002 121 Gene3D - 78 121 IPR036815 -
Gabi1060g00002 121 MobiDBLite consensus disorder prediction 34 48 - -
Gabi1060g00002 121 SUPERFAMILY 14-3-3 protein 92 121 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1060g00002 Gabi-Chr1060 11000 14946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1060g00002 87 121 14-3-3 family AT5G16050 82.857 3.80e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1060g00002 - - ccaj:109812892 102.834