Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1057g00013 ATGCAGCAAACTGATCAAACGGTCCTGAGCTTGAGGCCTGGCGGTGGTCGTGGCGGCGGAAGTAGGCTTTTCGGTCTCTCTTCAATCTCATCATCTTCTCCTTTTTCCGCTGATCTTCCTCTCTTGCGTCCTCATGGCGTTGCTCCTTCCTCTTTCTTTCTCAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCAATATACCAGAGATCAGATTTTACAGCTTAGAGAGGCTGTTGAGGTTCCCGATGATATTATAAAGATCCAACAAGATATAGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCATGTTGAAAACAATCCTCCTCGACAATTACAAAATCGATATTCTGAACCAGATAGCCGTGACTGGCATGGTCGCTCTGGACAACTTCCTGCTAATCCTGATGAGAGGTCTTGGGAAAATCTCAGAGATAACAGGGAGTTTGGTAATAGATTTGATTCTAGACAGCAGGATGCTAGTCAGGTTAATCGCCAAGACCAACTTAATTCCCAGTTTGCAAGGACACAAGGGGTAAGCCATCAGGGAGGACCTACTCCTACTCTAGTCAAGGCTGAGGTCCCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAAGATCGTGTCTTGAAGACTGTGAAAGGAATATTAAATAAGTTAACTCCTGAGAAGTTTGATCTCTTGAAGGGTCAGTTAATCGATTCTGGCATTACGTCATCTGACATCTTGAAGGGTGTCATTTCACTTGTATTTGATAAGGCTGTTCTAGAACCTACATTTTGCCCCATGTATGCTCAGTTGTGTTCAGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGTACCTGGTGGGAAAGATATCACTTTTAAGAGAGTACTCCTGAATATCTGCCAGGAGGCTTTTGAAGGTGCTTATAATCTGAGGGAAGAAGTAAAAAAGCTGACTGCCCCTGAGCAGGAGATGGAGCGTAGGGACAAGGAAAAACTGATCAAGCTTCGTACCCTTGGAAATATACGTTTAATTGGTGAACTATTGAAGCAGAAGATGGTTCATGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACAACCAGAGAGCAATTCTTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCATTTTTTCAATACCATTGGCAAGCAGCTTGATGAAAGCCCTAAATCACGGCGTATAAATGATATGTACTTTAGTCGATTGAAAGAACTGAGTACAAATCCTCAACTGGCACCGCGCCTTAGGTTCATGATTCGGAATGTTTTAGATTTGCGTGCTAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCCAAGACCATCACAGAAATTCATTCAGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCTAGTATGAGAAATATCCGTGGCGGTGTTCAAGGAAATGCCAGCCTGGGGGGCTTCCCCATTGGTCGTCCTGGTGCGGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGATTATGATGCCTGAAATGCCTGGAATTGATAACGACAACTGGGAGATGCCTAAGACTAAATCTATGCCAAGAGGAGACTTGTCAGGTATTCAAGCTGCAAGACGCAGCAACTCTTCTTTACATTCCAAATCCACAACCCTGAACTCAAAGTTGCTACCTCAAGGAAGTGGCGGTATTATAAGTGGAAGTAGTGCCCTAGTGCATGGAGGTGGTATCCTTTCTGCTCGCCCATCAAACTTTGGTTTAGGTACTGGGGCTGCATCTAAATCCCCTTCACCTCCTAAAACAGTCTCTGCTGTCTCCTCGGAGAAGCCACAGGCTCCAGCTGCTATATTGAATTCTGACAATCTTATTCTTCGCCGCAAAACTGTCGCTCTTCTGGAAGAATATTTCAATGTTCGGCTTTTGGATGAGGCATTGCGGTGCGTGGAGGAACTAAAATCTCCATCTTACCACCCTGAGGTAGTTAAGGAAGCCATTTCCCTTGGACTTGATAAAAGTCCACCATGCGTTGAACCCGTTGCCAGTCTTCTTGAGTATCTGTTTGTGAATAAGATCCTTACAGCTAGAGACATAGGGACTGGCTGTTTGTTATTTGGTTCTCTGCTGGATGACATTGGCATAGATTTACCTAAAGCGCCCAATAATTTTGGTGAGATAATTGGGAAACTAATTTTGGCAGGGGGATTGGATTTTAAGGTGGTGAACGAGATCCTGAAGAAGGTGGAAGATGACCTGTTCCCGAAAGAGATATTTGAAACTGCAGTACGGGTAATTACATCTGCATCTGGGCAAGCTGTGTTGGATGCACAAACAACTGACATTGAGGCTTGCCAGAGTCTGCTCAAGTGA 2376 0.4495 MQQTDQTVLSLRPGGGRGGGSRLFGLSSISSSSPFSADLPLLRPHGVAPSSFFLKAGDSRFEGRERVQYTRDQILQLREAVEVPDDIIKIQQDIEAELFGEDQSWGHVENNPPRQLQNRYSEPDSRDWHGRSGQLPANPDERSWENLRDNREFGNRFDSRQQDASQVNRQDQLNSQFARTQGVSHQGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSSDILKGVISLVFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEVPGGKDITFKRVLLNICQEAFEGAYNLREEVKKLTAPEQEMERRDKEKLIKLRTLGNIRLIGELLKQKMVHEKIVHHIVQELLGQPESNSCPAEENVEAICHFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLAPRLRFMIRNVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNIRGGVQGNASLGGFPIGRPGAGGLMPGMPGTRIMMPEMPGIDNDNWEMPKTKSMPRGDLSGIQAARRSNSSLHSKSTTLNSKLLPQGSGGIISGSSALVHGGGILSARPSNFGLGTGAASKSPSPPKTVSAVSSEKPQAPAAILNSDNLILRRKTVALLEEYFNVRLLDEALRCVEELKSPSYHPEVVKEAISLGLDKSPPCVEPVASLLEYLFVNKILTARDIGTGCLLFGSLLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVNEILKKVEDDLFPKEIFETAVRVITSASGQAVLDAQTTDIEACQSLLK 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1057g00013 791 MobiDBLite consensus disorder prediction 103 145 - -
Gabi1057g00013 791 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 60 785 IPR045208 GO:0003743
Gabi1057g00013 791 Pfam MA3 domain 627 739 IPR003891 -
Gabi1057g00013 791 SUPERFAMILY ARM repeat 627 768 IPR016024 -
Gabi1057g00013 791 Gene3D - 205 441 - -
Gabi1057g00013 791 SUPERFAMILY ARM repeat 208 443 IPR016024 -
Gabi1057g00013 791 MobiDBLite consensus disorder prediction 591 610 - -
Gabi1057g00013 791 ProSiteProfiles MI domain profile. 626 748 IPR003891 -
Gabi1057g00013 791 FunFam Eukaryotic translation initiation factor isoform 4G-2 205 441 - -
Gabi1057g00013 791 SMART if4_15 214 440 IPR003890 GO:0003723|GO:0005515
Gabi1057g00013 791 Gene3D - 625 785 - -
Gabi1057g00013 791 SMART ma3_7 627 739 IPR003891 -
Gabi1057g00013 791 Pfam MIF4G domain 214 440 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1057g00013 Gabi-Chr1057 181955 188450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1057g00013 1 789 Eukaryotic Initiation Factors Gene Family AT5G57870 63.965 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1057g00013 K03260 - gmx:100800438 1165.21