Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1057g00012 ATGCAGCAAACTGATCAAACGGTCCTGAGCTTGAGGCCTGGCGGTGGTCGTGGCGGCGGAAGTAGGCTTTTCGGTCTCTCTTCAATCTCATCATCTTCTCCTTTTTCCGCTGATCTTCCTCTCTTGCGTCCTCATGGCGTTGCTCCTTCCTCTTTCTTTCTCAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCAATATACCAGAGATCAGATTTTACAGCTTAGAGAGGCTGTTGAGGTTCCCGATGATATTATAAAGATCCAACAAGATATAGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCATGTTGAAAACAATCCTCCTCGACAATTACAAAATCGATATTCTGAACCAGATAGCCGTGACTGGCATGGTCGCTCTGGACAACTTCCTGCTAATCCTGATGAGAGGTCTTGGGAAAATCTCAGAGATAACAGGGAGTTTGGTAATAGATTTGATTCTAGACAGCAGGATGCTAGTCAGGTTAATCGCCAAGACCAACTTAATTCCCAGTTTGCAAGGACACAAGGGGGAGGACCTACTCCTACTCTAGTCAAGGCTGAGGTCCCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAAGATCGTGTCTTGAAGACTGTGAAAGGAATATTAAATAAGTTAACTCCTGAGAAGTTTGATCTCTTGAAGGGTCAGTTAATCGATTCTGGCATTACGTCATCTGACATCTTGAAGGGTGTCATTTCACTTGTATTTGATAAGGCTGTTCTAGAACCTACATTTTGCCCCATGTATGCTCAGTTGTGTTCAGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGTACCTGGTGGGAAAGATATCACTTTTAAGAGAGTACTCCTGAATATCTGCCAGGAGGCTTTTGAAGGTGCTTATAATCTGAGGGAAGAAGTAAAAAAGCTGACTGCCCCTGAGCAGGAGATGGAGCGTAGGGACAAGGAAAAACTGATCAAGCTTCGTACCCTTGGAAATATACGTTTAATTGGTGAACTATTGAAGCAGAAGATGGTTCATGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACAACCAGAGAGCAATTCTTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCATTTTTTCAATACCATTGGCAAGCAGCTTGATGAAAGCCCTAAATCACGGCGTATAAATGATATGTACTTTAGTCGATTGAAAGAACTGAGTACAAATCCTCAACTGGCACCGCGCCTTAGGTTCATGATTCGGAATGTTTTAGATTTGCGTGCTAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCCAAGACCATCACAGAAATTCATTCAGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCTAGTATGAGAAATATCCGTGGCGGTGTTCAAGGAAATGCCAGCCTGGGGGGCTTCCCCATTGGTCGTCCTGGTGCGGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGATTATGATGCCTGAAATGCCTGGAATTGATAACGACAACTGGGAGATGCCTAAGACTAAATCTATGCCAAGAGGAGACTTGTCAGGTATTCAAGCTGCAAGACGCAGCAACTCTTCTTTACATTCCAAATCCACAACCCTGAACTCAAAGTTGCTACCTCAAGGAAGTGGCGGTATTATAAGTGGAAGTAGTGCCCTAGTGCATGGAGGTGGTATCCTTTCTGCTCGCCCATCAAACTTTGGTTTAGGTACTGGGGCTGCATCTAAATCCCCTTCACCTCCTAAAACAGTCTCTGCTGTCTCCTCGGAGAAGCCACAGGCTCCAGCTGCTATATTGAATTCTGACAATCTTATTCTTCGCCGCAAAACTGTCGCTCTTCTGGAAGAATATTTCAATGTTCGGCTTTTGGATGAGGCATTGCGGTGCGTGGAGGAACTAAAATCTCCATCTTACCACCCTGAGGTAGTTAAGGAAGCCATTTCCCTTGGACTTGATAAAAGTCCACCATGCGTTGAACCCGTTGCCAGTCTTCTTGAGTATCTGTTTGTGAATAAGATCCTTACAGCTAGAGACATAGGGACTGGCTGTTTGTTATTTGGTTCTCTGCTGGATGACATTGGCATAGATTTACCTAAAGCGCCCAATAATTTTGGTGAGATAATTGGGAAACTAATTTTGGCAGGGGGATTGGATTTTAAGGTGGTGAACGAGATCCTGAAGAAGGTGGAAGATGACCTGTTCCCGAAAGAGATATTTGAAACTGCAGTACGGGTAATTACATCTGCATCTGGGCAAGCTGTGTTGGATGCACAAACAACTGACATTGAGGCTTGCCAGAGTCTGCTCAAGTGA 2364 0.4492 MQQTDQTVLSLRPGGGRGGGSRLFGLSSISSSSPFSADLPLLRPHGVAPSSFFLKAGDSRFEGRERVQYTRDQILQLREAVEVPDDIIKIQQDIEAELFGEDQSWGHVENNPPRQLQNRYSEPDSRDWHGRSGQLPANPDERSWENLRDNREFGNRFDSRQQDASQVNRQDQLNSQFARTQGGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSSDILKGVISLVFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEVPGGKDITFKRVLLNICQEAFEGAYNLREEVKKLTAPEQEMERRDKEKLIKLRTLGNIRLIGELLKQKMVHEKIVHHIVQELLGQPESNSCPAEENVEAICHFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLAPRLRFMIRNVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNIRGGVQGNASLGGFPIGRPGAGGLMPGMPGTRIMMPEMPGIDNDNWEMPKTKSMPRGDLSGIQAARRSNSSLHSKSTTLNSKLLPQGSGGIISGSSALVHGGGILSARPSNFGLGTGAASKSPSPPKTVSAVSSEKPQAPAAILNSDNLILRRKTVALLEEYFNVRLLDEALRCVEELKSPSYHPEVVKEAISLGLDKSPPCVEPVASLLEYLFVNKILTARDIGTGCLLFGSLLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVNEILKKVEDDLFPKEIFETAVRVITSASGQAVLDAQTTDIEACQSLLK 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1057g00012 787 Gene3D - 201 437 - -
Gabi1057g00012 787 MobiDBLite consensus disorder prediction 103 145 - -
Gabi1057g00012 787 SMART if4_15 210 436 IPR003890 GO:0003723|GO:0005515
Gabi1057g00012 787 Gene3D - 621 781 - -
Gabi1057g00012 787 Pfam MA3 domain 623 735 IPR003891 -
Gabi1057g00012 787 MobiDBLite consensus disorder prediction 587 606 - -
Gabi1057g00012 787 SMART ma3_7 623 735 IPR003891 -
Gabi1057g00012 787 ProSiteProfiles MI domain profile. 622 744 IPR003891 -
Gabi1057g00012 787 SUPERFAMILY ARM repeat 204 439 IPR016024 -
Gabi1057g00012 787 FunFam Eukaryotic translation initiation factor isoform 4G-2 201 437 - -
Gabi1057g00012 787 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 60 781 IPR045208 GO:0003743
Gabi1057g00012 787 Pfam MIF4G domain 210 436 IPR003890 GO:0003723|GO:0005515
Gabi1057g00012 787 SUPERFAMILY ARM repeat 623 764 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1057g00012 Gabi-Chr1057 181955 188450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1057g00012 1 785 Eukaryotic Initiation Factors Gene Family AT5G57870 63.965 0.0 945