Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1057g00011 ATGCAGCAAACTGATCAAACGGTCCTGAGCTTGAGGCCTGGCGGTGGTCGTGGCGGCGGAAGTAGGCTTTTCGGTCTCTCTTCAATCTCATCATCTTCTCCTTTTTCCGCTGATCTTCCTCTCTTGCGTCCTCATGGCGTTGCTCCTTCCTCTTTCTTTCTCAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCAATATACCAGAGATCAGATTTTACAGCTTAGAGAGGCTGTTGAGGTTCCCGATGATATTATAAAGATCCAACAAGATATAGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCATGTTGAAAACAATGTAACTCCTCCTCGACAATTACAAAATCGATATTCTGAACCAGATAGCCGTGACTGGCATGGTCGCTCTGGACAACTTCCTGCTAATCCTGATGAGAGGTCTTGGGAAAATCTCAGAGATAACAGGGAGTTTGGTAATAGATTTGATTCTAGACAGCAGGATGCTAGTCAGGTTAATCGCCAAGACCAACTTAATTCCCAGTTTGCAAGGACACAAGGGGTAAGCCAAAATCAGGGAGGACCTACTCCTACTCTAGTCAAGGCTGAGGTCCCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAAGATCGTGTCTTGAAGACTGTGAAAGGAATATTAAATAAGTTAACTCCTGAGAAGTTTGATCTCTTGAAGGGTCAGTTAATCGATTCTGGCATTACGTCATCTGACATCTTGAAGGGTGTCATTTCACTTGTATTTGATAAGGCTGTTCTAGAACCTACATTTTGCCCCATGTATGCTCAGTTGTGTTCAGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGTACCTGGTGGGAAAGATATCACTTTTAAGAGAGTACTCCTGAATATCTGCCAGGAGGCTTTTGAAGGTGCTTATAATCTGAGGGAAGAAGTAAAAAAGCTGACTGCCCCTGAGCAGGAGATGGAGCGTAGGGACAAGGAAAAACTGATCAAGCTTCGTACCCTTGGAAATATACGTTTAATTGGTGAACTATTGAAGCAGAAGATGGTTCATGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACAACCAGAGAGCAATTCTTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCATTTTTTCAATACCATTGGCAAGCAGCTTGATGAAAGCCCTAAATCACGGCGTATAAATGATATGTACTTTAGTCGATTGAAAGAACTGAGTACAAATCCTCAACTGGCACCGCGCCTTAGGTTCATGATTCGGAATGTTTTAGATTTGCGTGCTAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCCAAGACCATCACAGAAATTCATTCAGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCTAGTATGAGAAATATCCGTGGCGGTGTTCAAGGAAATGCCAGCCTGGGGGGCTTCCCCATTGGTCGTCCTGGTGCGGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGATTATGATGCCTGAAATGCCTGGAATTGATAACGACAACTGGGAGATGCCTAAGACTAAATCTATGCCAAGAGGAGACTTGTCAGGTATTCAAGCTGCAAGACGCAGCAACTCTTCTTTACATTCCAAATCCACAACCCTGAACTCAAAGTTGCTACCTCAAGGAAGTGGCGGTATTATAAGTGGAAGTAGTGCCCTAGTGCATGGAGGTGGTATCCTTTCTGCTCGCCCATCAAACTTTGGTTTAGGTACTGGGGCTGCATCTAAATCCCCTTCACCTCCTAAAACAGTCTCTGCTGTCTCCTCGGAGAAGCCACAGGCTCCAGCTGCTATATTGAATTCTGACAATCTTATTCTTCGCCGCAAAACTGTCGCTCTTCTGGAAGAATATTTCAATGTTCGGCTTTTGGATGAGGCATTGCGGTGCGTGGAGGAACTAAAATCTCCATCTTACCACCCTGAGGTAGTTAAGGAAGCCATTTCCCTTGGACTTGATAAAAGTCCACCATGCGTTGAACCCGTTGCCAGTCTTCTTGAGTATCTGTTTGTGAATAAGATCCTTACAGCTAGAGACATAGGGACTGGCTGTTTGTTATTTGGTTCTCTGCTGGATGACATTGGCATAGATTTACCTAAAGCGCCCAATAATTTTGGTGAGATAATTGGGAAACTAATTTTGGCAGGGGGATTGGATTTTAAGGTGGTGAACGAGATCCTGAAGAAGGTGGAAGATGACCTGTTCCCGAAAGAGATATTTGAAACTGCAGTACGGGTAATTACATCTGCATCTGGGCAAGCTGTGTTGGATGCACAAACAACTGACATTGAGGCTTGCCAGAGTCTGCTCAAGTGA 2385 0.4486 MQQTDQTVLSLRPGGGRGGGSRLFGLSSISSSSPFSADLPLLRPHGVAPSSFFLKAGDSRFEGRERVQYTRDQILQLREAVEVPDDIIKIQQDIEAELFGEDQSWGHVENNVTPPRQLQNRYSEPDSRDWHGRSGQLPANPDERSWENLRDNREFGNRFDSRQQDASQVNRQDQLNSQFARTQGVSQNQGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSSDILKGVISLVFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEVPGGKDITFKRVLLNICQEAFEGAYNLREEVKKLTAPEQEMERRDKEKLIKLRTLGNIRLIGELLKQKMVHEKIVHHIVQELLGQPESNSCPAEENVEAICHFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLAPRLRFMIRNVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNIRGGVQGNASLGGFPIGRPGAGGLMPGMPGTRIMMPEMPGIDNDNWEMPKTKSMPRGDLSGIQAARRSNSSLHSKSTTLNSKLLPQGSGGIISGSSALVHGGGILSARPSNFGLGTGAASKSPSPPKTVSAVSSEKPQAPAAILNSDNLILRRKTVALLEEYFNVRLLDEALRCVEELKSPSYHPEVVKEAISLGLDKSPPCVEPVASLLEYLFVNKILTARDIGTGCLLFGSLLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVNEILKKVEDDLFPKEIFETAVRVITSASGQAVLDAQTTDIEACQSLLK 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1057g00011 794 SMART ma3_7 630 742 IPR003891 -
Gabi1057g00011 794 SMART if4_15 217 443 IPR003890 GO:0003723|GO:0005515
Gabi1057g00011 794 SUPERFAMILY ARM repeat 211 446 IPR016024 -
Gabi1057g00011 794 Gene3D - 208 444 - -
Gabi1057g00011 794 FunFam Eukaryotic translation initiation factor isoform 4G-2 208 444 - -
Gabi1057g00011 794 MobiDBLite consensus disorder prediction 105 147 - -
Gabi1057g00011 794 Gene3D - 628 788 - -
Gabi1057g00011 794 MobiDBLite consensus disorder prediction 594 613 - -
Gabi1057g00011 794 Pfam MA3 domain 630 742 IPR003891 -
Gabi1057g00011 794 SUPERFAMILY ARM repeat 630 771 IPR016024 -
Gabi1057g00011 794 MobiDBLite consensus disorder prediction 106 121 - -
Gabi1057g00011 794 Pfam MIF4G domain 217 443 IPR003890 GO:0003723|GO:0005515
Gabi1057g00011 794 ProSiteProfiles MI domain profile. 629 751 IPR003891 -
Gabi1057g00011 794 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 60 788 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1057g00011 Gabi-Chr1057 181955 188451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1057g00011 1 792 Eukaryotic Initiation Factors Gene Family AT5G57870 63.806 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1057g00011 K03260 - gmx:100800438 1164.44