Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1057g00010 ATGCCCACTCGCTGTGAAATATGTTGTGAGATCATGATAGCTATCTTACTCCCTCCAGTCGGAGTTTGCTTCCGCCATGGTTGCTGCAGTGTGGAATTCATCATCTGTTTGCTCCTGACAATACTAGGGTATATTCCAGGAATAGTTTATGCACTCTATGTAATTGTGTTTGTTGATCGTGATCAGTATTTTGATGAATATAGGCGTCCCCTATATTCTGCATAA 225 0.4133 MPTRCEICCEIMIAILLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIVYALYVIVFVDRDQYFDEYRRPLYSA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1057g00010 74 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 60 IPR000612 GO:0016020
Gabi1057g00010 74 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1057g00010 Gabi-Chr1057 150020 151925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1057g00010 1 74 RCI2 Gene Family AT4G28088 75.676 1.38e-39 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1057g00010 - - gmx:100306426 153.295