Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1043g00014 ATGGAATTGCGTACCGGTTTTCCGTTACTGTTTCAACAATACAAGGCGTTGTTGAAGAAGAATTTGTTGCTGTCGTGGCGTTACAAGAGGGCGAGTCTCCTTCAACTCTTGTCTCCTCTCATATTCATATTCCTCATCTTCGCCATTGATAAAGCCATTAAGACTCAGTATTCAAACACCTCTTCTTACAAGAGCGTCACCGATCCTAATCCACAACCCTCTCCTCCTATCCCTCCCTGCGAGACCAAGTTCTTCGTCAAGCTTCCCTGTTATGATTTCGTGTGGAGCGGTGATGATAATCCCAAGTTTCACACCATTGTTGACCGTATCATGAATAACAACCCAGGCAGGCCTATATCTCCCGCCAAGGTTAAATCCTTTAAGGATAAAGGTGAAGTGGATGCGTGGCTTTTCAGTAATCCTATGTATTGTCCAGGGGCTCTACATTTCATGGAAAAAAATAACACTGTTATCAGCTATGGTGTACAGACAAACTCAACTAATCTTCAGAGGCGAGGGAAATATGAAGACCCCACTTTTGCGTTTCAACTCCCTCTTCAGCTTGCTGCAGAGCGTGAAATTGCCAGATACCTTATTGGTGACCCAAACTTCAGCTGGAATGTCTTTTTGAAGGAATTTGCTCATCCAGCCATGAGCCCCTTCTCTGCAGTGGGTTCAATTGGTCCAGCATTTTTCCTTGCTATTGCCATGTTTAATTTTGTTCTTCAGATGAGCTCTTTGGTGACAGAAAAAGAGCTTAAACTTCGCCAGGCAATGAGCATGATGGGCCTTTATGACTCTGCTTACTGGTTATCCTGGCTCACCTGGGAGGCAGTTGTTACACTCCTATCATCCCTTCTCATAGTTCTCTTTGGAATGATGTTTCAGTTTCGCTTTTTCTTGAAAAACAGTTTTGGGGTTCTATTCCTTGTGTTCTTCCTGTTTGAACTCAATATGACTGGCTTAGCCTTCATGTTATCGGCTTTCATTCGTAAATCATCTTCAGCTACAACTTTAGGCTTCTCCATATTCATTATAGGCTTCCTGACTCAGCTTGTTACACAAGCAGGATTTCCTTACACAACAAGCATCTCCAAAACTTTCCGGAATATCTGGTCATTATTCCCGCCCAATCCTTTTTCTCAAGCTCTACAAGTGCTTTCAGATGCGGTTTCAACTCCTGAAGATGATGGTCTTAGCTGGAGTAAACGGGGAGAATGCGCTCCTAATGATGATAACTGTGTGATAACTATTAATGATATTTATATATGGCTTTTGGTCACGTTCATACTATGGTTTGTTCTGGCCATCTACTTCGACAATATAATTCCAAATGCATCAGGGGTGAGAAAATCAATGCTATACTTTCTAAATCCCGGTTATTGGATGGGAAAAGGAGGACAAAAAGTAAAAGCCCCACATCAAGAGCATAGTACACCAGATGATGAAGATGTCCTTGAAGAGGAAAACACAGTAAAACAGAAACTAACAGAAGGTGTGGTTGACGCAAGCGTTGCTGTTCAGATACATGGCCTTGCGAAGACATATCCTGGTGCACGGAACATTGGTTGCTGTAAATGTAAAAGAACTCCTCCTTACAATGCTGTTAAGGATTTATGGGTGAACCTCGAAAAGGATCAGTTATTTTGTCTTTTAGGACCCAATGGAGCTGGAAAGACTACAGCTATTAATTGTTTGACTGGGATAACTCCAGTAACTGACGGAGATGCATTGATTTATGGAAATTCTGTCCGAAGCTCCACTGGCATGTCAAACATTCGAAAGCTTATAGGAGTATGTCCCCAGTTTGATATCCTATGGGATGCGCTGTCTGGTGAAGAACACCTCCAACTATTTGCTACTATTAAAGGCCTGTCCCCAACTTCCATACAATCAATTACCAAGACTTCATTGGAAGAGGTGAGACTCACAGAATCAGCTAAAGTGAGAGCTGGAAGTTATAGTGGAGGAATGAAACGTCGTCTCAGTGTTGCAATTGCCCTTATTGGTGACCCTAAATTAGTCATTTTGGATGAACCGACAACTGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAGAGGACGTGCCATTGTTCTTACAACACACTCTATGGAAGAAGCTGACATTTTAAGTGACCGCATAGGAATCATGGCAAAGGGAAGGCTTCGATGCATTGGCACCTCAATCAGATTGAAGTCACGCTTTGGTACTGGTTTTATTGCTAATATCAGCTTCTATGGAAACAATATCCATCACAGTCCTCCCAACGGAGATGCAATTTCCACAGAACAGCGCGATGCAGTGAAGCAGTTCTTTAAGAATCATTTAGATGTAGTGCCAAAAGAGGAGAACAATAACTTTCTAACTTTTGTGATTCCTCATGACAGAGAGGCGCTTCTGACAAATTTTTTTGCGGAGCTCCAAGATAGAGAAGAAAAATTTGGCATATCTGACATCCAGCTGGGTCTAACAACTCTTGAAGAAGTTTTCTTGAATATTGCAAAGCAAGCAGAGCTAGAAAGCGCTACAGCTGAAGGGAGCCTAGTGACTCTGACCTTAACATCTGGAGAGTCTGCGCAGATTCCTATAGGAGCTAGGTTTGTGGGAATTCCAGGAACAGAGTCTGCAGAAAGCCCCACAGGGTCTATGGTAGAAGTATACTGGGAGCAAGATGACACTGGTGCTCTATGTATTTCTGGCCACTCGCAGAAAGTTCCAATTCCTCCTGGCGTTGAACTATCATCATCTCCTGCTGCAAGGCAACGTAGAAACTGGCGCCGGTCAGCGCCAGTTCATGGGGTTGTGATCAATCCCAGTCAAGTTAGTTCAGTCAATTTTCAGTGA 2868 0.4296 MELRTGFPLLFQQYKALLKKNLLLSWRYKRASLLQLLSPLIFIFLIFAIDKAIKTQYSNTSSYKSVTDPNPQPSPPIPPCETKFFVKLPCYDFVWSGDDNPKFHTIVDRIMNNNPGRPISPAKVKSFKDKGEVDAWLFSNPMYCPGALHFMEKNNTVISYGVQTNSTNLQRRGKYEDPTFAFQLPLQLAAEREIARYLIGDPNFSWNVFLKEFAHPAMSPFSAVGSIGPAFFLAIAMFNFVLQMSSLVTEKELKLRQAMSMMGLYDSAYWLSWLTWEAVVTLLSSLLIVLFGMMFQFRFFLKNSFGVLFLVFFLFELNMTGLAFMLSAFIRKSSSATTLGFSIFIIGFLTQLVTQAGFPYTTSISKTFRNIWSLFPPNPFSQALQVLSDAVSTPEDDGLSWSKRGECAPNDDNCVITINDIYIWLLVTFILWFVLAIYFDNIIPNASGVRKSMLYFLNPGYWMGKGGQKVKAPHQEHSTPDDEDVLEEENTVKQKLTEGVVDASVAVQIHGLAKTYPGARNIGCCKCKRTPPYNAVKDLWVNLEKDQLFCLLGPNGAGKTTAINCLTGITPVTDGDALIYGNSVRSSTGMSNIRKLIGVCPQFDILWDALSGEEHLQLFATIKGLSPTSIQSITKTSLEEVRLTESAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNIHHSPPNGDAISTEQRDAVKQFFKNHLDVVPKEENNNFLTFVIPHDREALLTNFFAELQDREEKFGISDIQLGLTTLEEVFLNIAKQAELESATAEGSLVTLTLTSGESAQIPIGARFVGIPGTESAESPTGSMVEVYWEQDDTGALCISGHSQKVPIPPGVELSSSPAARQRRNWRRSAPVHGVVINPSQVSSVNFQ 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1043g00014 955 Pfam ABC-2 family transporter protein 32 438 IPR013525 GO:0016020|GO:0140359
Gabi1043g00014 955 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 507 752 IPR003439 GO:0005524
Gabi1043g00014 955 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 482 848 IPR026082 GO:0016020|GO:0055085|GO:0140359
Gabi1043g00014 955 CDD ABC_subfamily_A 507 740 - -
Gabi1043g00014 955 ProSitePatterns ABC transporters family signature. 654 668 IPR017871 GO:0005524|GO:0016887
Gabi1043g00014 955 Pfam ABC transporter 537 681 IPR003439 GO:0005524
Gabi1043g00014 955 FunFam ABC transporter A family member 2 497 760 - -
Gabi1043g00014 955 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 529 743 IPR027417 -
Gabi1043g00014 955 Gene3D - 497 749 IPR027417 -
Gabi1043g00014 955 SMART AAA_5 545 729 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1043g00014 Gabi-Chr1043 145152 152984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1043g00014 531 751 Calmodulin-binding Proteins AT2G36910 20.747 7.26e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1043g00014 - - gmx:100786538 1597.79