Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1043g00007 ATGGAAAATGGAAACACGCCCAATGAACCCGCTAGTTTCTGGACTCAAGCAAACGCTCTCCTTAGGAAGAATTTAACCTTCCAGAAACGAAATGTGAAGACAACGATTAGGCTAATCATGTACCCGTTCTTGCTGTGTCTGTTGCTGGTTCTAATCCAAAAGCTGCTAGATATTCAATTGGACAAGGCTAAAAACAAGTGTGGATGCATTTGTAGCAAGACACAAGGGGACAATTGTATTGAGAAAGTGTGTGGTATTCAGTATTCGGATTTGGATCAAGTTGGAACATGTCCAATTCCTAACCCTCCTGAATGGCCTCCTCTGTTGCAAGTGCCTGCTCCACAATATCGTGCTGTGAGAACGGATTTTCTTCCCTTTTCTGATTTGCCAAACCAGTCTTGCAGGAACAATGGCTCGTGTCCTGTTACTATGTTCTTCACCGGCACTAACCAATCTTTTGGAGAAATTTTATCTGGGAATATGATCCCAAGTACCTTTACCATAAATAATTCCGATGTTATGGGTAGTCTGGCAACAAATGTCGTGGGATCATCATCAAAGACACAGTACGACAATTTTCTGGAACCTGCTTTCTTTTCGGATCTTCCCATTTATTATCTACAAAGTCAGTGTACACAGAACTCTACATTCTCCATTCCTGTTCAGATATCAACCATTAGCAGCCAGCAAGAGGTAACATGTGCTCAGGGTTTACGTTTATGGCGTAATAGTTCTTCTGAGGTAAACAATGAGCTGTTTAAAGGTTATAGAAGGGGTAACACAGAGAAACAGATCGATGAGATAGCTGCAGGTTATGATTTTCTAAATTCAAATGGAAATAGATATAATGTCAGCATATGGTACAACTCAACCTACAAAAATGACACAGGCTTTGCATCTATTGCGTTGGCGCGTATTCCTCGTTCTGTAAATCTGGTATCTAATGCCTACCTTCAGTTTCTGCTGGGACCTGGTACCCAAATGTTGTTTGAGTTTGTAAAGGAAATGCCGAAACCTGAGACCCCAATTAAATTTGATTTGGCTTCTCTACTGGGGCCTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTATTATCCTGACATCGCTTGTTTATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCGTATTGGATGATTTCTTATGGTTATTTTCTTGCCTTATCTATTGTCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGGGTTAAAATTCTTCACAATGAATGACTACAGCATCCAATCCGTGTTTTATTTCATCTATATAAATTTACAAATATCGCTGGCATTTCTGTTGGCTTCCCTGTTTTCAAATGTTAAGACAGCAACAGTAGTTGCATATATAGGTGTGTTTGGAACTGGGCTCTTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGATACATCGTTTCCAAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTTCACAATCTTCATTCAATGGGAATGCTTTGGGGACTAATGGAATGCGGTGGAAAGATCTAAGTAATAGCACGAATGGCATGAAAGATGTCTTAATTATCATGTTCGTGGAGTGGGTATTGGTGCTTTTTTTGGCATATTACATGGATCAAGTTTTGTCATCTGGAAGTGGGAAAAGTCCTCTCTTTTTCTTGAAAGGATTTCAGAAAAAGCCTAGTTCATCTTTTAGGAAGCCTAGTATCCAAAGGCAGGGATCTAAAGTTTTTGTTCAGATGGAGAAACCAGATGTCAATCAAGAGAGAGAGAAGGTGGAACAGCTGCTACTTGAACCAACTATTAATCATGCAATTGTATGTGACAACCTGAGAAAGGTCTATCCGGGGAGGGATGGTAACCCAGAGAAATTTGCAGTGAAAGGGTTGTCCCTTGCTTTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAACATGATGATTGGTCTCACAAAGCCAACCTCTGGTACAGCATATGTTCAAGGTCTTGACATAAGAACTGATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAAACCCTATCAGGAAGAGAGCACCTTCTCTTTTATGGCAGACTTAAAAATCTTAAGGGTTCAGCCTTAACACAAGCAGTGGAAGAATCTTTGAAAAGTGTAAACCTTTTTCATGGAGGAGTTGCTGATAAAAAAACTGGAAAATACAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCTATTTCATTGATTGGAGATCCTCGACACATTCAATGGAAGAGGCAGAAGTCCTATGTGATCGATTAG 2397 0.4043 MENGNTPNEPASFWTQANALLRKNLTFQKRNVKTTIRLIMYPFLLCLLLVLIQKLLDIQLDKAKNKCGCICSKTQGDNCIEKVCGIQYSDLDQVGTCPIPNPPEWPPLLQVPAPQYRAVRTDFLPFSDLPNQSCRNNGSCPVTMFFTGTNQSFGEILSGNMIPSTFTINNSDVMGSLATNVVGSSSKTQYDNFLEPAFFSDLPIYYLQSQCTQNSTFSIPVQISTISSQQEVTCAQGLRLWRNSSSEVNNELFKGYRRGNTEKQIDEIAAGYDFLNSNGNRYNVSIWYNSTYKNDTGFASIALARIPRSVNLVSNAYLQFLLGPGTQMLFEFVKEMPKPETPIKFDLASLLGPLFFTWVILQLFPIILTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLALSIVYMLCFVIFGSVIGLKFFTMNDYSIQSVFYFIYINLQISLAFLLASLFSNVKTATVVAYIGVFGTGLLAGFLFQFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQSSFNGNALGTNGMRWKDLSNSTNGMKDVLIIMFVEWVLVLFLAYYMDQVLSSGSGKSPLFFLKGFQKKPSSSFRKPSIQRQGSKVFVQMEKPDVNQEREKVEQLLLEPTINHAIVCDNLRKVYPGRDGNPEKFAVKGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAYVQGLDIRTDMDGIYTSMGVCPQHDLLWETLSGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKKTGKYSGGMKRRLSVAISLIGDPRHIQWKRQKSYVID 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1043g00007 798 Gene3D - 619 788 IPR027417 -
Gabi1043g00007 798 Pfam ABC transporter 649 785 IPR003439 GO:0005524
Gabi1043g00007 798 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 21 576 IPR026082 GO:0016020|GO:0055085|GO:0140359
Gabi1043g00007 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 627 786 IPR027417 -
Gabi1043g00007 798 Pfam ABC-2 family transporter protein 269 558 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1043g00007 Gabi-Chr1043 44903 53721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1043g00007 603 784 Calmodulin-binding Proteins AT2G36910 23.316 5.09e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1043g00007 - - gmx:100805474 1346.26