Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1041g00008 ATGGTCTCCTTAAGGCCATGCCTTCTTTTCATTCTTATCTGCATTTTGATAATTAATCAGGCATATTCCAAGAATGATCGGAAGACTTATATTGTCTACATGGGTGATCATCCTAAGGACATGGACTCCACATCCTTACCTTTTCTTCATATGGACATGGCTCAAAAGATCCATGGCAGTGATTTTGCACCAGAAGCTATACTTCACAGCTACAAGAGCTTTAATGGGTTCGTCATGAAGTTAACAGAAGAGGAGGCGGAAAGAATGGCAGAAATGGACACTGTCGTCTCTGTTTTCCCAAACAAAAAGAACCGTCTTCACACAACAAGATCGTGGGACTTCCTAGGCTTTCCCCAGCAAGTCAAAAGAACAAGTATTGAGAGTAACATAATTGTTGGAGTATTAGACAGTGGAATTTGGCCAGAGTCTGAGAGCTTCAGCGACAAAGGATTTGGTCCACCACCAAGCAAATGGAAAGGTTCATGCCATAACATTACCTGCAACAACAAAGTGATTGGTGCAAAATACTTTAATATCGAAAGTGATTATACCAAAGAGGACATAAAATCTCCTAGGGATACAGAAGGGCACGGGTCACACTGTGCATCAACGATTGCTGGAAACATGGTTAACCATGCAAGTCTACTAGGCTTTGCCAGCGGAACAGCCCGTGGAGGAGTTCCATCAGCACGAATTGCTGTGTACAAAATATGTTGGAAATCTGGTTGTTCAGATGCTGACACACTTGCAGCATTTGATGAAGCAATTGCTGATGGAGTTGACTTGATTTCTACATCAACGGGAGCAGCTGAAGTAGTACACTATGAGTATTTTGAAGATGCAATTAATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTGACGTCACAATCTGCTGGTAATGAGGGTCCGGAGCTTTACTCTATGTCAAATTATCCCCCTTGGTTACTTTCTGTTGCTGCTACCACTATTAACAGAAAGTTCCTTACCAAGCTTCAATTGGGCAGTGGCATGGTTTATGAGGGGGTTTCAATTAACACATTTGATCTCAAAAGCAAAATGTTTCCCCTGATTTTATTTCCCGGGATTTGGAGCGATAAGACTTTGGATAAACGTTTGGTGAAGGGAAAGATCATTCTATGTTATGGCTTCAACGTTACAGACGTTAGGTTTTTGTCTGGTGCGGTTGGTGTTATTGTTGGAGCCATTGGTGCGAAAGACCGAGCAAGTGCATATGCCCTGCCTGCCACTGTTCTCACTGTCAACGACTTCAGACTCGTAAATTCTTACATTGATTCAGCGGGCAAAAATGCAACAGCCACCATATTCAGGAGTGATGAAGTCAATAATTCGTCTGCACCTTACATAGCTTCGTTCTCATCAAGAGGTCCAAATCCAATTACTCCAAACATTCTTAAGCCTGATCTCGCTGCCCCAGGTGTTAATATTATAGCTGCATATTCTCCAATGAACCCAATTTCAGATGTCGAAGGTGACAAAAGACTAGTAAACTATAATGTAATTTCTGGCACTTCAATGGCTTGTCCTCATGCCGCTGGGGCAGCTGTATACGTCAAATCATTTCACCCCAATTGGTCTGCTGCTATGATCAAGTCTGCCTTGATGACCACAGGTACTCCAATGAGTGCTGCTCTTAATCCTGAAGCTGAATTTGCATATGGGGCAGGGGAAATTAATCCACTTAAGGCAGTAAATCCTGGTTTAGTATATGATATTAGCGAAGCAGATTATGTCAAGTTCTTATGCGGTGAAGGGTATACAAATAAAAAGCTCAGAGTACTCACTCAAGATCATGCTAATTGCAGCAAAAAAGTTAACAAGGTAGCAGTATACGACCTTAATCTCCCATCATTTGCTCTTAAAGTAAACGCCTCTTTCTATAGTGTTTTCCGTCGAACAGTTACAAATGTGGGATCGGCAACATCTAGTTATAAAGCTAAATTGATGTTTCCATCTTTCTTGGATATTCAAGTGAAACCAGATGTTTTGTCCTTCACATCTATTGGGCAGAAAAAGTCATTCTCGGTCATAATTGTTGGGAAGATTAATGTGGAAATAACCTCTGCCTCTTTGGTTTGGGATGATGGCAATTATCAAGTTAGAAGTCCAATTGTAATATATGGGAATCCTCCAAAAATTCTATGA 2169 0.4112 MVSLRPCLLFILICILIINQAYSKNDRKTYIVYMGDHPKDMDSTSLPFLHMDMAQKIHGSDFAPEAILHSYKSFNGFVMKLTEEEAERMAEMDTVVSVFPNKKNRLHTTRSWDFLGFPQQVKRTSIESNIIVGVLDSGIWPESESFSDKGFGPPPSKWKGSCHNITCNNKVIGAKYFNIESDYTKEDIKSPRDTEGHGSHCASTIAGNMVNHASLLGFASGTARGGVPSARIAVYKICWKSGCSDADTLAAFDEAIADGVDLISTSTGAAEVVHYEYFEDAINIGSFHAMKRGILTSQSAGNEGPELYSMSNYPPWLLSVAATTINRKFLTKLQLGSGMVYEGVSINTFDLKSKMFPLILFPGIWSDKTLDKRLVKGKIILCYGFNVTDVRFLSGAVGVIVGAIGAKDRASAYALPATVLTVNDFRLVNSYIDSAGKNATATIFRSDEVNNSSAPYIASFSSRGPNPITPNILKPDLAAPGVNIIAAYSPMNPISDVEGDKRLVNYNVISGTSMACPHAAGAAVYVKSFHPNWSAAMIKSALMTTGTPMSAALNPEAEFAYGAGEINPLKAVNPGLVYDISEADYVKFLCGEGYTNKKLRVLTQDHANCSKKVNKVAVYDLNLPSFALKVNASFYSVFRRTVTNVGSATSSYKAKLMFPSFLDIQVKPDVLSFTSIGQKKSFSVIIVGKINVEITSASLVWDDGNYQVRSPIVIYGNPPKIL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1041g00008 722 ProSitePatterns Serine proteases, subtilase family, serine active site. 511 521 IPR023828 -
Gabi1041g00008 722 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Gabi1041g00008 722 PRINTS Subtilisin serine protease family (S8) signature 510 526 IPR015500 -
Gabi1041g00008 722 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Gabi1041g00008 722 Pfam Subtilase family 128 564 IPR000209 GO:0006508|GO:0008236
Gabi1041g00008 722 Gene3D - 589 716 - -
Gabi1041g00008 722 FunFam Subtilisin-like protease SBT1.5 129 345 - -
Gabi1041g00008 722 CDD Peptidases_S8_3 106 545 IPR034197 -
Gabi1041g00008 722 Gene3D Peptidase S8/S53 domain 129 585 IPR036852 GO:0004252|GO:0006508
Gabi1041g00008 722 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 713 IPR045051 -
Gabi1041g00008 722 Gene3D - 326 450 - -
Gabi1041g00008 722 Pfam Fibronectin type-III domain 620 714 IPR041469 -
Gabi1041g00008 722 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 107 IPR037045 -
Gabi1041g00008 722 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Gabi1041g00008 722 SUPERFAMILY Subtilisin-like 106 576 IPR036852 GO:0004252|GO:0006508
Gabi1041g00008 722 CDD PA_subtilisin_like 333 443 - -
Gabi1041g00008 722 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Gabi1041g00008 722 ProSiteProfiles Serine proteases, subtilase domain profile. 111 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1041g00008 Gabi-Chr1041 138726 142906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1041g00008 7 715 Subtilisin-like Serine Gene Family AT3G46850 47.297 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1041g00008 - - gmx:100815516 1021.15