Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1038g00010 ATGCGCAAAAGCATTTGCATGGGAATGTCCTTTCAGCAGGATTACCACTTGGATGTAAAGGCAGCTAAAAAATCTATACTTGACGGTTTTCGTAAAACTGATGAGGCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAAAGTTTTTGTGGCAAATGTAGGAGATGCCAAAGCAGTTTTAGCTCGGTCAACTATAACTGATGGATTCCAAGATCACTCAGATGGAGTCCCTGCACTAAAGGCCATTGTTTTGACGAGAGAACACAAACCTATCTTCCCGCAGGAGCGTGCACGTATTCAGAAGGCTGGTGGTGTTGTGAGCTCAAATGGACGATTACAAGGGCGTCTAGAAGTTTCTAGGGGTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTTTTATTGCAACCCCAGATATCCATTCTTTTGACCTGACAGATAGAGAGCATTTCATCATTCTTGGCTGTGATGGTTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGACTACCCGTTGCGGTCGTGAGCCGCCGTCTTGTAAGAGAAGCTGTTCGTGAGCGTCGATGTAAAGATAACTGCACTGCAATTGTCATTGTATTCAGGCGCAATTAA 678 0.4513 MRKSICMGMSFQQDYHLDVKAAKKSILDGFRKTDEALLQESAEGGWQDGATAVCVWVLGQKVFVANVGDAKAVLARSTITDGFQDHSDGVPALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRGFGDRQFKKVGFIATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVAVVSRRLVREAVRERRCKDNCTAIVIVFRRN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1038g00010 225 SUPERFAMILY PP2C-like 14 223 IPR036457 -
Gabi1038g00010 225 CDD PP2Cc 10 222 IPR001932 -
Gabi1038g00010 225 Gene3D - 6 225 IPR036457 -
Gabi1038g00010 225 SMART PP2C_4 3 220 IPR001932 -
Gabi1038g00010 225 Pfam Protein phosphatase 2C 21 210 IPR001932 -
Gabi1038g00010 225 ProSiteProfiles PPM-type phosphatase domain profile. 1 222 IPR001932 -
Gabi1038g00010 225 PANTHER PROTEIN PHOSPHATASE 2C 24 220 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1038g00010 Gabi-Chr1038 189886 194158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1038g00010 17 174 PP2C-type Phosphatase Gene Family AT1G18030 75.316 4.11e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1038g00010 K17500 - pop:7453894 357.451